RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ADGRD2Q7Z7M1 963 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 HORMAD1Q86X24 394 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 FOXP4Q8IVH2 680 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 C12orf76Q8N812 135 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 AGBL3Q8NEM8 1001 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GRPEL2Q8TAA5 225 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MAGEB10Q96LZ2 347 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 FOXN4Q96NZ1 517 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MAP3K3Q99759 626 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GDF15Q99988 308 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 REEP2Q9BRK0 252 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ALKBH7Q9BT30 221 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 FUCA2Q9BTY2 467 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TEKT3Q9BXF9 490 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GEMIN7Q9H840 131 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZNF358Q9NW07 568 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ONECUT1Q9UBC0 465 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NKX1-2Q9UD57 310 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 ARMCX3Q9UH62 379 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZNFX1Q9P2E3 1918 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZNF518AQ6AHZ1 1483 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 A0A1W2PPV4 95 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 A0A1W2PRG6 482 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 C17orf102A2RUQ5 167 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZNF487B1APH4 448 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CHADO15335 359 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PRPF4O43172 522 aaKnown RBP eCLIP3.39□□□□□ -1.87
UBR3-208ENST00000474426 NUAK1O60285 661 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SNNO75324 88 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 ERN1O75460 977 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 RAF1P04049 648 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GPIP06744 558 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CYP2C8P10632 490 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CYP11B1P15538 503 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PSMB5P28074 263 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PPP2R1BP30154 601 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CCR7P32248 378 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GRK4P32298 578 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NR4A2P43354 598 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MAP2K4P45985 399 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PREPP48147 710 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CXCR3P49682 368 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 STK19P49842 368 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 KPNA2P52292 529 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 SNW1Q13573 536 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 ADGRE1Q14246 886 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SLC9A3R2Q15599 337 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SLC1A5Q15758 541 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 LRRC36Q1X8D7 754 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CIAPIN1Q6FI81 312 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TMEM220Q6QAJ8 160 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 USP30Q70CQ3 517 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 RAB44Q7Z6P3 723 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZDHHC13Q8IUH4 622 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NUDCD3Q8IVD9 361 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 STK40Q8N2I9 435 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CADM2Q8N3J6 435 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MREGQ8N565 214 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZNF561Q8N587 486 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 OR52N2Q8NGI0 321 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NEK7Q8TDX7 302 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SLC22A17Q8WUG5 538 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PRPF31Q8WWY3 499 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 PIGBQ92521 554 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 DTD2Q96FN9 168 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 OXNAD1Q96HP4 312 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 RCC1LQ96I51 464 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 LCORQ96JN0 433 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 RNF145Q96MT1 663 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TMEM47Q9BQJ4 181 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 COLEC11Q9BWP8 271 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 RTN4RQ9BZR6 473 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NMUR2Q9GZQ4 415 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ELOVL4Q9GZR5 314 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 RAB1BQ9H0U4 201 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CSTL1Q9H114 145 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CD209Q9NNX6 404 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PARD6AQ9NPB6 346 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SLC6A13Q9NSD5 602 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 RNF146Q9NTX7 359 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 DNAJC17Q9NVM6 304 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 SDHAF2Q9NX18 166 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MID2Q9UJV3 735 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 FBXL3Q9UKT7 428 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GUCA1BQ9UMX6 200 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.39□□□□□ -1.87
UBR3-208ENST00000474426 MRPS18CQ9Y3D5 142 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 TBL2Q9Y4P3 447 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 MYH15Q9Y2K3 1946 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 A0A1W2PPC1 479 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 A0A1W2PPQ1 181 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 WIPF1O43516 503 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 NME2P1O60361 137 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 SCGB2A1O75556 95 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 MOCS2O96007 188 aaPredicted RBP3.38□□□□□ -1.87
UBR3-208ENST00000474426 ADRB1P08588 477 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 NBEAP1P0C6P0 100 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 TRIM49P0CI25 452 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 TRIM49CP0CI26 452 aa3.38□□□□□ -1.87
UBR3-208ENST00000474426 CYP4B1P13584 511 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms