RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 TRIM48Q8IWZ4 208 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 LMX1AQ8TE12 382 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 SLC5A11Q8WWX8 675 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 SH3KBP1Q96B97 665 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 PTCD3Q96EY7 689 aaKnown RBP19.65■□□□□ 0.74
CDHR3-210ENST00000474330 EHD1Q9H4M9 534 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 AKTIPQ9H8T0 292 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 CPNE7Q9UBL6 633 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 MANBAO00462 879 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 FOXD2O60548 495 aaPredicted RBP19.65■□□□□ 0.74
CDHR3-210ENST00000474330 VIPP01282 170 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 C1GALT1C1LP0DN25 315 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 CTSKP43235 329 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 ZNF33BQ06732 778 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 ABRAXAS2Q15018 415 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 ZRSR2Q15696 482 aaKnown RBP19.65■□□□□ 0.74
CDHR3-210ENST00000474330 DUOXA1Q1HG43 343 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 GALNTL6Q49A17 601 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 ATG9BQ674R7 924 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 SCIMPQ6UWF3 145 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 CCDC121Q6ZUS5 278 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 CHSY3Q70JA7 882 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 TMPRSS11BQ86T26 416 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 AMIGO1Q86WK6 493 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 CEP76Q8TAP6 659 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 SLC37A2Q8TED4 501 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 ZDHHC1Q8WTX9 485 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 LCN9Q8WX39 176 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 PATE1Q8WXA2 126 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 PRR11Q96HE9 360 aaPredicted RBP19.65■□□□□ 0.74
CDHR3-210ENST00000474330 RIC8BQ9NVN3 520 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 OR6C2Q9NZP2 312 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 TAC3Q9UHF0 121 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 SH2B3Q9UQQ2 575 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 CACNA1AO00555 2505 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 H0YIV9 168 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 YY2O15391 372 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 AQP9O43315 295 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 UBOX5O94941 541 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 PRR35P0CG20 571 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 NCF2P19878 526 aaPredicted RBP19.64■□□□□ 0.73
CDHR3-210ENST00000474330 CATSPEREQ5SY80 951 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 NXPE4Q6UWF7 544 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 Q6ZSR9 355 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 TRIM46Q7Z4K8 759 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 C17orf64Q86WR6 236 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 ZNF548Q8NEK5 533 aaPredicted RBP19.64■□□□□ 0.73
CDHR3-210ENST00000474330 TUBGCP3Q96CW5 907 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 EFCAB11Q9BUY7 163 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 CCDC106Q9BWC9 280 aa19.64■□□□□ 0.73
CDHR3-210ENST00000474330 ZNF490Q9ULM2 529 aaPredicted RBP19.64■□□□□ 0.73
CDHR3-210ENST00000474330 LNP1A1A4G5 178 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 SERTM1A2A2V5 107 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 PRICKLE3O43900 615 aaPredicted RBP19.63■□□□□ 0.73
CDHR3-210ENST00000474330 PIAS2O75928 621 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 VARSP26640 1264 aaKnown RBP19.63■□□□□ 0.73
CDHR3-210ENST00000474330 KIF19Q2TAC6 998 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 AASDHQ4L235 1098 aaPredicted RBP19.63■□□□□ 0.73
CDHR3-210ENST00000474330 SLC9B2Q86UD5 537 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 OR2A1Q8NGT9 310 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 OR2T11Q8NH01 316 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 ACAT2Q9BWD1 397 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 TWSG1Q9GZX9 223 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 ELOVL6Q9H5J4 265 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 FARSBQ9NSD9 589 aaKnown RBP19.63■□□□□ 0.73
CDHR3-210ENST00000474330 DOLKQ9UPQ8 538 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 PCDHB11Q9Y5F2 797 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 PCDHGA11Q9Y5H2 935 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 SNX11Q9Y5W9 270 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 CABIN1Q9Y6J0 2220 aa19.63■□□□□ 0.73
CDHR3-210ENST00000474330 LMO7DNF2Z398 122 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 SLC28A1O00337 649 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 KHNYNO15037 678 aaKnown RBP19.62■□□□□ 0.73
CDHR3-210ENST00000474330 CFIP05156 583 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 LBPP18428 481 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 LAPTM5Q13571 262 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 GPR18Q14330 331 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 PUM1Q14671 1186 aaKnown RBP eCLIP19.62■□□□□ 0.73
CDHR3-210ENST00000474330 PAGE2BQ5JRK9 111 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 FRG2Q64ET8 278 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 TMEM198Q66K66 360 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 OGFOD2Q6N063 350 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 SFTPA2Q8IWL1 248 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 RBM12BQ8IXT5 1001 aaKnown RBP19.62■□□□□ 0.73
CDHR3-210ENST00000474330 CPSF7Q8N684 471 aaKnown RBP19.62■□□□□ 0.73
CDHR3-210ENST00000474330 OR4E2Q8NGC2 313 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 WDR20Q8TBZ3 569 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 NETO1Q8TDF5 533 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 SELENOMQ8WWX9 145 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 FRG2BQ96QU4 278 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 ZNF385DQ9H6B1 395 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 ARMCX1Q9P291 453 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 CCL27Q9Y4X3 112 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 PCDH15Q96QU1 1955 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 CAPN14A8MX76 684 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 UBDO15205 165 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 RGS14O43566 566 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 PDYNP01213 254 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 PSMB5P28074 263 aa19.62■□□□□ 0.73
CDHR3-210ENST00000474330 RXRGP48443 463 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms