RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	TXNDC8	Q6A555	127 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	SZRD1	Q7Z422	152 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	VRK3	Q8IV63	474 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	ZBTB2	Q8N680	514 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	PAPD5	Q8NDF8	572 aa	Known RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	OR4K1	Q8NGD4	311 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	DCSTAMP	Q9H295	470 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	KAT8	Q9H7Z6	458 aa	Known RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	HEBP1	Q9NRV9	189 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	RAD18	Q9NS91	495 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	MARCH5	Q9NX47	278 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	GPR83	Q9NYM4	423 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	ZNF236	Q9UL36	1845 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	BRWD1	Q9NSI6	2320 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	IGLV3-10	A0A075B6K4	115 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	RFXAP	O00287	272 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	KPNA5	O15131	536 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	RGS10	O43665	173 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	SPN	P16150	400 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	ITGAL	P20701	1170 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	TCEA1	P23193	301 aa	Known RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	RPP38	P78345	283 aa	Known RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	PTCHD3	Q3KNS1	767 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	UBE2R2	Q712K3	238 aa	Predicted RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	ALDH16A1	Q8IZ83	802 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	MYO19	Q96H55	970 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	ZNF558	Q96NG5	402 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	MAGEH1	Q9H213	219 aa		10.43	□□□□□ -0.74
LSS-208	ENST00000474319	PAK6	Q9NQU5	681 aa	Predicted RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	DDX28	Q9NUL7	540 aa	Known RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	DCAF13	Q9NV06	445 aa	Known RBP	10.43	□□□□□ -0.74
LSS-208	ENST00000474319	DYTN	A2CJ06	578 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	DRGX	A6NNA5	263 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	ZNF701	M0R085	212 aa	Predicted RBP	10.42	□□□□□ -0.74
LSS-208	ENST00000474319	CLIC1	O00299	241 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	AQP9	O43315	295 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	JRK	O75564	520 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	IGHA2	P01877	340 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	GADD45A	P24522	165 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	LIPA	P38571	399 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	CRAT	P43155	626 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	TRPC1	P48995	793 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	MAPKAPK2	P49137	400 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.42	□□□□□ -0.74	5e-23	■■■■■ 28.1
LSS-208	ENST00000474319	HKDC1	Q2TB90	917 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	ZNF691	Q5VV52	312 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	BEND5	Q7L4P6	421 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	ARL14EP	Q8N8R7	260 aa	Predicted RBP	10.42	□□□□□ -0.74
LSS-208	ENST00000474319	SMAD5	Q99717	465 aa	Known RBP	10.42	□□□□□ -0.74
LSS-208	ENST00000474319	CD244	Q9BZW8	370 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	WBP1L	Q9NX94	342 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	IL17C	Q9P0M4	197 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	TMEM9	Q9P0T7	183 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	PIKFYVE	Q9Y2I7	2098 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	GNG14	A0A1W2PPG7	69 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	UGT2B11	O75310	529 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	STC2	O76061	302 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	EPO	P01588	193 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	NAT1	P18440	290 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	TYMP	P19971	482 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	HTR7	P34969	479 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	HNF1B	P35680	557 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	CYP4F8	P98187	520 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	CACNG1	Q06432	222 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	TAB1	Q15750	504 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	KCNJ8	Q15842	424 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	COQ5	Q5HYK3	327 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	CPZ	Q66K79	652 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	LRRC66	Q68CR7	880 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	OR2T5	Q6IEZ7	315 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	TTC30B	Q8N4P2	665 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	DPP10	Q8N608	796 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	ZNF366	Q8N895	744 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	C7orf57	Q8NEG2	295 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	OR2T29	Q8NH02	315 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	DNASE1L2	Q92874	299 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	SCAMP4	Q969E2	229 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	ZNF641	Q96N77	438 aa	Predicted RBP	10.42	□□□□□ -0.74
LSS-208	ENST00000474319	COPS8	Q99627	209 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	OR51E2	Q9H255	320 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	REEP1	Q9H902	201 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	RLIM	Q9NVW2	624 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	THUMPD1	Q9NXG2	353 aa	Known RBP	10.42	□□□□□ -0.74
LSS-208	ENST00000474319	RABL2B	Q9UNT1	228 aa		10.42	□□□□□ -0.74
LSS-208	ENST00000474319	TMA7	Q9Y2S6	64 aa	Known RBP	10.42	□□□□□ -0.74
LSS-208	ENST00000474319	TNPO3	Q9Y5L0	923 aa	Known RBP	10.42	□□□□□ -0.74
LSS-208	ENST00000474319	GLYATL1P3	A0A0U1RQE8	302 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	HTR3E	A5X5Y0	456 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	KDELR3	O43731	214 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	AIRE	O43918	545 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	PCDHGA12	O60330	932 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	CLDN9	O95484	217 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	KRT6A	P02538	564 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	KRT6B	P04259	564 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	HOXB8	P17481	243 aa	Predicted RBP	10.41	□□□□□ -0.74
LSS-208	ENST00000474319	RRM2	P31350	389 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	SERPINB10	P48595	397 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	KRT6C	P48668	564 aa		10.41	□□□□□ -0.74
LSS-208	ENST00000474319	TGM4	P49221	684 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms