RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SLC16A5O15375 505 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 CNOT3O75175 753 aaKnown RBP10.69□□□□□ -0.7
CKS1B-206ENST00000474215 CEACAM4O75871 244 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 ALBP02768 609 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 NR1D1P20393 614 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 IMPA1P29218 277 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 OTX2P32243 289 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 CASRP41180 1078 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 EMP3P54852 163 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 RRADP55042 308 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 ARF3P61204 181 aaPredicted RBP10.69□□□□□ -0.7
CKS1B-206ENST00000474215 MRPS25P82663 173 aaKnown RBP10.69□□□□□ -0.7
CKS1B-206ENST00000474215 KLRB1Q12918 225 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 CALCOCO2Q13137 446 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 SP140Q13342 867 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
CKS1B-206ENST00000474215 ATP1A4Q13733 1029 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 FASTKD3Q14CZ7 662 aaKnown RBP10.69□□□□□ -0.7
CKS1B-206ENST00000474215 THEMIS2Q5TEJ8 643 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 HECTD2Q5U5R9 776 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 ZNF425Q6IV72 752 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 SYT10Q6XYQ8 523 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 MRGPREQ86SM8 312 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 GPATCH11Q8N954 259 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 NACC2Q96BF6 587 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 LINGO1Q96FE5 620 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 SLC25A23Q9BV35 468 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 SLC26A1Q9H2B4 701 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 WDR54Q9H977 334 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 MLXIPLQ9NP71 852 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 ABCF3Q9NUQ8 709 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 MOCS1Q9NZB8 636 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 WHRNQ9P202 907 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 ZFATQ9P243 1243 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 PDE10AQ9Y233 779 aa10.69□□□□□ -0.7
CKS1B-206ENST00000474215 PCDHGA9Q9Y5G4 932 aaKnown RBP10.69□□□□□ -0.7
CKS1B-206ENST00000474215 PYCARD-AS1I3L0S3 204 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 PEX12O00623 359 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 RAD51CO43502 376 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 WISP1O95388 367 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 TSPAN12O95859 305 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 IGHEP01854 428 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 PDGFAP04085 211 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 UMODP07911 640 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 HIST1H2AGP0C0S8 130 aaPredicted RBP10.68□□□□□ -0.7
CKS1B-206ENST00000474215 EZRP15311 586 aaKnown RBP10.68□□□□□ -0.7
CKS1B-206ENST00000474215 HIST1H2ADP20671 130 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 FDXRP22570 491 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 HRH2P25021 359 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 OR1D4P47884 311 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 PGDP52209 483 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 FOXL2P58012 376 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 TLE1Q04724 770 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 MUM1Q2TAK8 710 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 PRTGQ2VWP7 1150 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 DUPD1Q68J44 220 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 FAM45BPQ6NSW5 357 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 PRMT9Q6P2P2 845 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 AGTRAPQ6RW13 159 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 STRA8Q7Z7C7 330 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 ZBED8Q8IZ13 594 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 TEX19Q8NA77 164 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 FAM45AQ8TCE6 357 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.68□□□□□ -0.7
CKS1B-206ENST00000474215 PDLIM5Q96HC4 596 aaKnown RBP10.68□□□□□ -0.7
CKS1B-206ENST00000474215 HIST1H2AHQ96KK5 128 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 FER1L6-AS2Q96M78 137 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 OR2A5Q96R48 311 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 HIST1H2AJQ99878 128 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 H2AFJQ9BTM1 129 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 PCBD2Q9H0N5 130 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 DPH5Q9H2P9 285 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 ZNF304Q9HCX3 659 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 CCDC177Q9NQR7 707 aaPredicted RBP10.68□□□□□ -0.7
CKS1B-206ENST00000474215 TMEM184CQ9NVA4 438 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 P4HTMQ9NXG6 502 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 STOX2Q9P2F5 926 aaPredicted RBP10.68□□□□□ -0.7
CKS1B-206ENST00000474215 PSAT1Q9Y617 370 aa10.68□□□□□ -0.7
CKS1B-206ENST00000474215 A6NL46 340 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 H7BY64 318 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 TXNDC9O14530 226 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 MED26O95402 600 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 MMP11P24347 488 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 CSRP3P50461 194 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 PGGT1BP53609 377 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 KCNC4Q03721 635 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 C2orf54Q08AI8 447 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 NKG7Q16617 165 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 PHKG1Q16816 387 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 DCAF10Q5QP82 559 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 COX15Q7KZN9 410 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 PPP1R32Q7Z5V6 425 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 ADCK2Q7Z695 626 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 SLC26A11Q86WA9 606 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 ZC3HC1Q86WB0 502 aaKnown RBP10.67□□□□□ -0.7
CKS1B-206ENST00000474215 TMEM151BQ8IW70 566 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 DTWD1Q8N5C7 304 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 METTL27Q8N6F8 245 aaPredicted RBP10.67□□□□□ -0.7
CKS1B-206ENST00000474215 CSNK1A1LQ8N752 337 aa10.67□□□□□ -0.7
CKS1B-206ENST00000474215 PYROXD1Q8WU10 500 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms