RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 C14orf105Q9NVL8 296 aa16.5■□□□□ 0.23
CUL4A-208ENST00000474116 PCDHA3Q9Y5H8 950 aa16.5■□□□□ 0.23
CUL4A-208ENST00000474116 CACNA1CQ13936 2221 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 KRT87PA6NCN2 255 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 H0YGG7 62 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 MFAP3LO75121 409 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 C1orf105O95561 183 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 GOT2P00505 430 aaKnown RBP16.49■□□□□ 0.23
CUL4A-208ENST00000474116 APOA4P06727 396 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 ARF3P61204 181 aaPredicted RBP16.49■□□□□ 0.23
CUL4A-208ENST00000474116 LONRF1Q17RB8 773 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 KRTCAP3Q53RY4 240 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 NCCRP1Q6ZVX7 275 aaPredicted RBP16.49■□□□□ 0.23
CUL4A-208ENST00000474116 ZNF534Q76KX8 674 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 ARHGEF39Q8N4T4 335 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 CHTF18Q8WVB6 975 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 MAGED4Q96JG8 741 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 CABS1Q96KC9 395 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 TTC1Q99614 292 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 ZFYVE21Q9BQ24 234 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 YIPF2Q9BWQ6 316 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 TSSK1BQ9BXA7 367 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 GPAMQ9HCL2 828 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 MKKSQ9NPJ1 570 aaPredicted RBP16.49■□□□□ 0.23
CUL4A-208ENST00000474116 SLC2A6Q9UGQ3 507 aa16.49■□□□□ 0.23
CUL4A-208ENST00000474116 SYCE3A1L190 88 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 PRPF4O43172 522 aaKnown RBP eCLIP16.48■□□□□ 0.236e-10■■■■□ 21.4
CUL4A-208ENST00000474116 ERVK-10P10266 1014 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 CTNNA1P35221 906 aaKnown RBP16.48■□□□□ 0.23
CUL4A-208ENST00000474116 MAGEA1P43355 309 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 H3F3CQ6NXT2 135 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 TTC23LQ6PF05 361 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 AFTPHQ6ULP2 937 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 ZC3H7AQ8IWR0 971 aaKnown RBP16.48■□□□□ 0.23
CUL4A-208ENST00000474116 MDS2Q8NDY4 140 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 DPH7Q9BTV6 452 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 TUBB6Q9BUF5 446 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 TEKT2Q9UIF3 430 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 TFR2Q9UP52 801 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 RUVBL1Q9Y265 456 aaKnown RBP16.48■□□□□ 0.23
CUL4A-208ENST00000474116 NEU2Q9Y3R4 380 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 NFS1Q9Y697 457 aa16.48■□□□□ 0.23
CUL4A-208ENST00000474116 ASPDHA6ND91 283 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 RCCD1A6NED2 376 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 PSMD3O43242 534 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 FOXS1O43638 330 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 DIAPH2O60879 1101 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 ZNF189O75820 626 aaPredicted RBP16.47■□□□□ 0.23
CUL4A-208ENST00000474116 TPM3P06753 285 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 BDKRB1P46663 353 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 CSNK1G2P78368 415 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 ACVR1Q04771 509 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 FASTKQ14296 549 aaKnown RBP16.47■□□□□ 0.23
CUL4A-208ENST00000474116 SYT16Q17RD7 645 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 HKDC1Q2TB90 917 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 AADACL2Q6P093 401 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 FAM71DQ8N9W8 422 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 OR52K1Q8NGK4 314 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 OR4L1Q8NH43 312 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 MMABQ96EY8 250 aaPredicted RBP16.47■□□□□ 0.23
CUL4A-208ENST00000474116 ZNF778Q96MU6 729 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 SIGLEC12Q96PQ1 595 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 MKL2Q9ULH7 1088 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 RIMKLBQ9ULI2 386 aa16.47■□□□□ 0.23
CUL4A-208ENST00000474116 TTC7AQ9ULT0 858 aaPredicted RBP16.47■□□□□ 0.23
CUL4A-208ENST00000474116 A8MUI8 341 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 FAM227AF5H4B4 570 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 ADAM10O14672 748 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 TTI1O43156 1089 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 TJP3O95049 919 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 ALDH6A1Q02252 535 aaKnown RBP16.46■□□□□ 0.23
CUL4A-208ENST00000474116 TUBA3CQ13748 450 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 ACER2Q5QJU3 275 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 TSTD2Q5T7W7 516 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 GARNL3Q5VVW2 1013 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 LRRC8BQ6P9F7 803 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 TUBA3EQ6PEY2 450 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 MEX3BQ6ZN04 569 aaKnown RBP16.46■□□□□ 0.23
CUL4A-208ENST00000474116 SIAH3Q8IW03 269 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 CHERPQ8IWX8 916 aaKnown RBP16.46■□□□□ 0.23
CUL4A-208ENST00000474116 BEST3Q8N1M1 668 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 CSNK1A1LQ8N752 337 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 PHF10Q8WUB8 498 aaKnown RBP16.46■□□□□ 0.23
CUL4A-208ENST00000474116 SCMH1Q96GD3 660 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 PLCD4Q9BRC7 762 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 HES7Q9BYE0 225 aa16.46■□□□□ 0.23
CUL4A-208ENST00000474116 TSPAN10Q9H1Z9 355 aaPredicted RBP16.46■□□□□ 0.23
CUL4A-208ENST00000474116 RUVBL2Q9Y230 463 aaKnown RBP16.46■□□□□ 0.23
CUL4A-208ENST00000474116 NIPBLQ6KC79 2804 aaeCLIP16.46■□□□□ 0.22
CUL4A-208ENST00000474116 SCN2AQ99250 2005 aa16.45■□□□□ 0.22
CUL4A-208ENST00000474116 A0A0A6YYC8 382 aaPredicted RBP16.45■□□□□ 0.22
CUL4A-208ENST00000474116 IGKV1-8A0A0C4DH67 115 aa16.45■□□□□ 0.22
CUL4A-208ENST00000474116 A0A0U1RQJ8 604 aa16.45■□□□□ 0.22
CUL4A-208ENST00000474116 NPIPA5E9PKD4 350 aa16.45■□□□□ 0.22
CUL4A-208ENST00000474116 I3L1I5 382 aaPredicted RBP16.45■□□□□ 0.22
CUL4A-208ENST00000474116 ZNHIT1O43257 154 aa16.45■□□□□ 0.22
CUL4A-208ENST00000474116 SEC24DO94855 1032 aaPredicted RBP16.45■□□□□ 0.22
CUL4A-208ENST00000474116 C8orf89P0DMQ9 161 aa16.45■□□□□ 0.22
CUL4A-208ENST00000474116 CD1EP15812 388 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms