RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 IRGCQ6NXR0 463 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 NXPE4Q6UWF7 544 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF771Q7L3S4 317 aaPredicted RBP9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 PIGWQ7Z7B1 504 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 L3MBTL4Q8NA19 623 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 KYQ8NBH2 561 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 TTLQ8NG68 377 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 CEP70Q8NHQ1 597 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 C10orf82Q8WW14 230 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 N4BP2L2Q92802 583 aaPredicted RBP9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 ATOH1Q92858 354 aaPredicted RBP9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 NAT6Q93015 286 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 PPP3R2Q96LZ3 170 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 LRRC37BQ96QE4 947 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 FRG2BQ96QU4 278 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 KCNA7Q96RP8 456 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 CCDC28BQ9BUN5 200 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 PITHD1Q9GZP4 211 aaPredicted RBP9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 MEAF6Q9HAF1 191 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 CAPN10Q9HC96 672 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 HRASLS2Q9NWW9 162 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 ACTR10Q9NZ32 417 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 LRIT1Q9P2V4 623 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 ZFP69BQ9UJL9 534 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 SNX7Q9UNH6 387 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 RNF11Q9Y3C5 154 aa9.91□□□□□ -0.82
PRPF38A-202ENST00000474048 PCM1Q15154 2024 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 GON4LQ3T8J9 2241 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 TRIOO75962 3097 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 OR5K3A6NET4 321 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 PATE3B3GLJ2 98 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 E9PBE3 544 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 MANBAO00462 879 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 PPP6CO00743 305 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 NUDT21O43809 227 aaKnown RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 KLHL41O60662 606 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 SERPIND1P05546 499 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 RETP07949 1114 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 HSD3B1P14060 373 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ALOX15P16050 662 aaPredicted RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 GLB1P16278 677 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 NPPBP16860 134 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ENGP17813 658 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 CDH3P22223 829 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 HSD3B2P26439 372 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 PSMB5P28074 263 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 EPHA3P29320 983 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 SERPINB3P29508 390 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ALDH4A1P30038 563 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 PRDX3P30048 256 aaKnown RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ARRB2P32121 409 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 IDH3AP50213 366 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 RAP1GDS1P52306 607 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 CSTF3Q12996 717 aaKnown RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 GALNTL6Q49A17 601 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 CGB2Q6NT52 195 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 OGFOD3Q6PK18 319 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 EPGNQ6UW88 154 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 TMIGD1Q6UXZ0 262 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF761Q86XN6 746 aaPredicted RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 GATAD2AQ86YP4 633 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 MINDY1Q8N5J2 469 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF655Q8N720 491 aaPredicted RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 GBP7Q8N8V2 638 aaPredicted RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 LINC01555Q8NAE3 123 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 OR2L3Q8NG85 312 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 OR4C6Q8NH72 309 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 RERGQ96A58 199 aaPredicted RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 MTFMTQ96DP5 389 aaKnown RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ZDHHC12Q96GR4 267 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 OR4K3Q96R72 315 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 NLNQ9BYT8 704 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 SYNDIG1Q9H7V2 258 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 FSCN3Q9NQT6 498 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 TMEM184CQ9NVA4 438 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ANKMY1Q9P2S6 941 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 HEY2Q9UBP5 337 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 PADI4Q9UM07 663 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 DNAJC15Q9Y5T4 150 aa9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ARHGEF17Q96PE2 2063 aaPredicted RBP9.9□□□□□ -0.82
PRPF38A-202ENST00000474048 ADAMTS9Q9P2N4 1935 aa9.9□□□□□ -0.83
PRPF38A-202ENST00000474048 PI4KAP42356 2102 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 PRAMEF33A0A0G2JMD5 474 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 A0A0J9YY10 115 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CPED1A4D0V7 1026 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 H0YIV9 168 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 H7BY64 318 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 UBDO15205 165 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 OR1F1O43749 312 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 NOBOXO60393 691 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 RASSF9O75901 435 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 UGT2B7P16662 529 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 TYRP1P17643 537 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 LBPP18428 481 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 GSTM2P28161 218 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CASP2P42575 452 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 GRK6P43250 576 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms