RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 H3BMM5 538 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 AP3B1O00203 1094 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 PSIP1O75475 530 aaKnown RBP12.74□□□□□ -0.37
COPS7B-219ENST00000474042 VAPBO95292 243 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 ESR1P03372 595 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 EIF2S1P05198 315 aaKnown RBP12.74□□□□□ -0.37
COPS7B-219ENST00000474042 PRR35P0CG20 571 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 MGAT1P26572 445 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 ARF3P61204 181 aaPredicted RBP12.74□□□□□ -0.37
COPS7B-219ENST00000474042 BASP1P80723 227 aaKnown RBP12.74□□□□□ -0.37
COPS7B-219ENST00000474042 ARHGAP19Q14CB8 494 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 ZRSR2Q15696 482 aaKnown RBP12.74□□□□□ -0.37
COPS7B-219ENST00000474042 CCNG2Q16589 344 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 VWA2Q5GFL6 755 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 KIAA0930Q6ICG6 404 aaPredicted RBP12.74□□□□□ -0.37
COPS7B-219ENST00000474042 ZNF425Q6IV72 752 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 MRNIPQ6NTE8 343 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 FBXO42Q6P3S6 717 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 C4orf22Q6V702 233 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 LAPTM4BQ86VI4 370 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 SLC34A3Q8N130 599 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 BCORP1Q8N888 145 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 AMER3Q8N944 861 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 CATSPER1Q8NEC5 780 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 OR9A1PQ8NGU1 263 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 ACAT2Q9BWD1 397 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 TSGA10Q9BZW7 698 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 OLAHQ9NV23 265 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 BFARQ9NZS9 450 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
COPS7B-219ENST00000474042 SOX13Q9UN79 622 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 RUVBL1Q9Y265 456 aaKnown RBP12.74□□□□□ -0.37
COPS7B-219ENST00000474042 LRBAP50851 2863 aa12.74□□□□□ -0.37
COPS7B-219ENST00000474042 LOC102723996A0A087X1L8 192 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 IGHV1-45A0A0A0MS14 117 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 IDSB3KWA1 339 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 PCDH17O14917 1159 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 PRPF4O43172 522 aaKnown RBP eCLIP12.73□□□□□ -0.37
COPS7B-219ENST00000474042 ZG16O60844 167 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 VPS26AO75436 327 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 SERPINA7P05543 415 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 TPSB2P20231 275 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 OGNP20774 298 aaKnown RBP12.73□□□□□ -0.37
COPS7B-219ENST00000474042 FMO4P31512 558 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 TNFSF10P50591 281 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 CDK16Q00536 496 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 TPSAB1Q15661 275 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 ACSBG2Q5FVE4 666 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 GARNL3Q5VVW2 1013 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 ARMC3Q5W041 872 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 SUSD1Q6UWL2 747 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 CES3Q6UWW8 571 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 NDUFAF7Q7L592 441 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 OTUD6BQ8N6M0 293 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 CSNK1A1LQ8N752 337 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
COPS7B-219ENST00000474042 SMPDL3AQ92484 453 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 NR4A3Q92570 626 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 FAM136AQ96C01 138 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 TAAR6Q96RI8 345 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 TCF12Q99081 682 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 TGIF2Q9GZN2 237 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 MRPS30Q9NP92 439 aaKnown RBP12.73□□□□□ -0.37
COPS7B-219ENST00000474042 RIC8BQ9NVN3 520 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 GALPQ9UBC7 116 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 TRPC4Q9UBN4 977 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 CDC14AQ9UNH5 594 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 ENTPD4Q9Y227 616 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 DRG1Q9Y295 367 aaKnown RBP12.73□□□□□ -0.37
COPS7B-219ENST00000474042 ZKSCAN5Q9Y2L8 839 aa12.73□□□□□ -0.37
COPS7B-219ENST00000474042 A0A1B0GUH1 482 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 GOLGA8KD6RF30 607 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 GOLGA8TH3BQL2 631 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 FFAR3O14843 346 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 GPR42O15529 346 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 FOXS1O43638 330 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 JRKO75564 520 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 BMP10O95393 424 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 CELA2AP08217 269 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 EZRP15311 586 aaKnown RBP12.72□□□□□ -0.37
COPS7B-219ENST00000474042 TNFRSF8P28908 595 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 CDC25BP30305 580 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 RPA3P35244 121 aaPredicted RBP12.72□□□□□ -0.37
COPS7B-219ENST00000474042 SLC26A3P40879 764 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 EFNA3P52797 238 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 PNLIPRP1P54315 467 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 EMP2P54851 167 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 ARG2P78540 354 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 RELAQ04206 551 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 EEF1A2Q05639 463 aaKnown RBP12.72□□□□□ -0.37
COPS7B-219ENST00000474042 PCOLCEQ15113 449 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 HKDC1Q2TB90 917 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 KLHL38Q2WGJ6 581 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 ANKRD20A4Q4UJ75 823 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 ICE2Q659A1 982 aa12.72□□□□□ -0.37
COPS7B-219ENST00000474042 LRRC8BQ6P9F7 803 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms