RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 PTERQ96BW5 349 aa16.31■□□□□ 0.2
COMMD3-210ENST00000472610 PDLIM5Q96HC4 596 aaKnown RBP16.31■□□□□ 0.2
COMMD3-210ENST00000472610 PHACTR1Q9C0D0 580 aa16.31■□□□□ 0.2
COMMD3-210ENST00000472610 ING2Q9H160 280 aa16.31■□□□□ 0.2
COMMD3-210ENST00000472610 CCDC177Q9NQR7 707 aaPredicted RBP16.31■□□□□ 0.2
COMMD3-210ENST00000472610 STOX2Q9P2F5 926 aaPredicted RBP16.31■□□□□ 0.2
COMMD3-210ENST00000472610 TLK1Q9UKI8 766 aa16.31■□□□□ 0.2
COMMD3-210ENST00000472610 ADAMTS6Q9UKP5 1117 aa16.31■□□□□ 0.2
COMMD3-210ENST00000472610 PTRH2Q9Y3E5 179 aaKnown RBP16.31■□□□□ 0.2
COMMD3-210ENST00000472610 HEATR5BQ9P2D3 2071 aa16.31■□□□□ 0.2
COMMD3-210ENST00000472610 CCDC88CQ9P219 2028 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 LOC105369274A0A096LPK9 316 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 LOC102723532A0A0G2JNH3 316 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 ARGFXA6NJG6 315 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 TXNDC9O14530 226 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 SUV39H1O43463 412 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 SLC28A2O43868 658 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 IGHEP01854 428 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 EIF2S1P05198 315 aaKnown RBP16.3■□□□□ 0.2
COMMD3-210ENST00000472610 GSTA2P09210 222 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 EZRP15311 586 aaKnown RBP16.3■□□□□ 0.2
COMMD3-210ENST00000472610 CCND1P24385 295 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 RRADP55042 308 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 MUM1Q2TAK8 710 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 PRMT9Q6P2P2 845 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 ATG14Q6ZNE5 492 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 CYS1Q717R9 158 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 OVCH1Q7RTY7 1134 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 PRICKLE2Q7Z3G6 844 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 ZC3HC1Q86WB0 502 aaKnown RBP16.3■□□□□ 0.2
COMMD3-210ENST00000472610 SPNS2Q8IVW8 549 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 OR4N4Q8N0Y3 316 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 OR2Y1Q8NGV0 311 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 CDKL2Q92772 493 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 NACC2Q96BF6 587 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 SAYSD1Q9NPB0 183 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 ZNF71Q9NQZ8 489 aaPredicted RBP16.3■□□□□ 0.2
COMMD3-210ENST00000472610 ABCF3Q9NUQ8 709 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 TMEM184CQ9NVA4 438 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 GRHL1Q9NZI5 618 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 CDC23Q9UJX2 597 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 ANAPC2Q9UJX6 822 aa16.3■□□□□ 0.2
COMMD3-210ENST00000472610 IGKV1-8A0A0C4DH67 115 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 H0YGG7 62 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 J3QKU1 62 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 TSPAN12O95859 305 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 ENO2P09104 434 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-210ENST00000472610 AP1S2P56377 157 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 ARF3P61204 181 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-210ENST00000472610 AGTRAPQ6RW13 159 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 NKAPQ8N5F7 415 aaKnown RBP16.29■□□□□ 0.2
COMMD3-210ENST00000472610 ANKRD7Q92527 254 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 RERGQ96A58 199 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-210ENST00000472610 VPS39Q96JC1 886 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 OLFM1Q99784 485 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 TRIM55Q9BYV6 548 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 SLC26A1Q9H2B4 701 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 WDR54Q9H977 334 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 SLC22A11Q9NSA0 550 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 G3BP2Q9UN86 482 aaKnown RBP16.29■□□□□ 0.2
COMMD3-210ENST00000472610 CDC14AQ9UNH5 594 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 TP53TG5Q9Y2B4 290 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 PCDHGA9Q9Y5G4 932 aaKnown RBP16.29■□□□□ 0.2
COMMD3-210ENST00000472610 PSAT1Q9Y617 370 aa16.29■□□□□ 0.2
COMMD3-210ENST00000472610 SMG1Q96Q15 3661 aaKnown RBP16.29■□□□□ 0.2
COMMD3-210ENST00000472610 MDC1Q14676 2089 aaKnown RBP16.28■□□□□ 0.2
COMMD3-210ENST00000472610 ANKRD12Q6UB98 2062 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 CFAP46Q8IYW2 2715 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 FAM95CA0A1B0GW59 222 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 PEX12O00623 359 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 NRP2O60462 931 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 SSTR1P30872 391 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 OTX2P32243 289 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 CCL11P51671 97 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 PLTPP55058 493 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 TBPL1P62380 186 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 SLC9A5Q14940 896 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 PRTGQ2VWP7 1150 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 FAM69BQ5VUD6 431 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 GARNL3Q5VVW2 1013 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 PRAMEF13Q5VWM6 474 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 ADCK2Q7Z695 626 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 PTRH1Q86Y79 214 aaKnown RBP16.28■□□□□ 0.2
COMMD3-210ENST00000472610 ATL1Q8WXF7 558 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 MVB12AQ96EY5 273 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 FER1L6-AS2Q96M78 137 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 C16orf45Q96MC5 204 aaPredicted RBP16.28■□□□□ 0.2
COMMD3-210ENST00000472610 OR2A5Q96R48 311 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 RHOJQ9H4E5 214 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 ZNF304Q9HCX3 659 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 ARL15Q9NXU5 204 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 TXNDC16Q9P2K2 825 aa16.28■□□□□ 0.2
COMMD3-210ENST00000472610 NXT1Q9UKK6 140 aaKnown RBP16.28■□□□□ 0.2
COMMD3-210ENST00000472610 NOVA2Q9UNW9 492 aaKnown RBP16.28■□□□□ 0.2
COMMD3-210ENST00000472610 FASNP49327 2511 aaKnown RBP16.27■□□□□ 0.2
COMMD3-210ENST00000472610 H7BY64 318 aa16.27■□□□□ 0.2
COMMD3-210ENST00000472610 CNOT3O75175 753 aaKnown RBP16.27■□□□□ 0.2
COMMD3-210ENST00000472610 DNAJB5O75953 348 aa16.27■□□□□ 0.2
COMMD3-210ENST00000472610 URI1O94763 535 aaPredicted RBP16.27■□□□□ 0.2
COMMD3-210ENST00000472610 TUBB4AP04350 444 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms