RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 EDF1O60869 148 aaKnown RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 SHOX2O60902 331 aaPredicted RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 WFS1O76024 890 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 OR4F21O95013 312 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 CLDN9O95484 217 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 C9P02748 559 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 ENO1P06733 434 aaKnown RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 GP1BAP07359 652 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 CD22P20273 847 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 VARSP26640 1264 aaKnown RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 CD1CP29017 333 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 LSP1P33241 339 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 CASP2P42575 452 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 LSSP48449 732 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 ACADVLP49748 655 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 GFERP55789 205 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 REEP5Q00765 189 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 IRF8Q02556 426 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 CFHR1Q03591 330 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 SQSTM1Q13501 440 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 DOC2AQ14183 400 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 NAA25Q14CX7 972 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 SF1Q15637 639 aaKnown RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 XKR6Q5GH73 641 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 SH2D4BQ5SQS7 431 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 CATSPEREQ5SY80 951 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 KIAA1614Q5VZ46 1190 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 LIPJQ5W064 366 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 KANK2Q63ZY3 851 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 GRHL2Q6ISB3 625 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 ZNF425Q6IV72 752 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 IRGCQ6NXR0 463 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 NXPE4Q6UWF7 544 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 FAM47EQ6ZV65 393 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 MILR1Q7Z6M3 343 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 PIP4P1Q86T03 277 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 FAM129CQ86XR2 697 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 FAM20CQ8IXL6 584 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 ZNF781Q8N8C0 355 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 DCBLD1Q8N8Z6 715 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 PTCD3Q96EY7 689 aaKnown RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 MAGEB10Q96LZ2 347 aaPredicted RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 ZNF317Q96PQ6 595 aaPredicted RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 CD180Q99467 661 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 EFCAB11Q9BUY7 163 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 SHCBP1LQ9BZQ2 653 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 SPNS1Q9H2V7 528 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 ACTR8Q9H981 624 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 ANKMY1Q9P2S6 941 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 RAPGEFL1Q9UHV5 662 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 ADAM21Q9UKJ8 722 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.18□□□□□ -0.62
FN1-217ENST00000471193 CABIN1Q9Y6J0 2220 aa11.18□□□□□ -0.62
FN1-217ENST00000471193 ANKRD12Q6UB98 2062 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 TLCD2A6NGC4 264 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 TMEM233B4DJY2 109 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 GIPC1O14908 333 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 CASC3O15234 703 aaKnown RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 CAPN5O15484 640 aaPredicted RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 TNFSF14O43557 240 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 RPLP0P05388 317 aaKnown RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 C1GALT1C1LP0DN25 315 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 HGFP14210 728 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 JUPP14923 745 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 MAGP20916 626 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 HRH2P25021 359 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 ARL1P40616 181 aaPredicted RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 HNF4AP41235 474 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 GRIA3P42263 894 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 PPM1FP49593 454 aaPredicted RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 CCR8P51685 355 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 FOXA1P55317 472 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 CSNK1G2P78368 415 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 CCL7P80098 99 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 SLBPQ14493 270 aaKnown RBP eCLIP11.17□□□□□ -0.62
FN1-217ENST00000471193 CLPPQ16740 277 aaPredicted RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 TUBB8Q3ZCM7 444 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 AMZ1Q400G9 498 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 FAM219BQ5XKK7 198 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 WDR74Q6RFH5 385 aaPredicted RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 PAQR7Q86WK9 346 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 PLXDC1Q8IUK5 500 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 KIRREL3Q8IZU9 778 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 CARFQ8N187 725 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 CDYL2Q8N8U2 506 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 OR4K1Q8NGD4 311 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 AGR3Q8TD06 166 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 NCSTNQ92542 709 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 CHMP6Q96FZ7 201 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 ZDHHC12Q96GR4 267 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 PRR11Q96HE9 360 aaPredicted RBP11.17□□□□□ -0.62
FN1-217ENST00000471193 PPM1MQ96MI6 270 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 TGM7Q96PF1 710 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 KCNA7Q96RP8 456 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 CDC6Q99741 560 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 DPH7Q9BTV6 452 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 SLC29A3Q9BZD2 475 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 ZMYND15Q9H091 742 aa11.17□□□□□ -0.62
FN1-217ENST00000471193 ILKAPQ9H0C8 392 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms