RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 SYNPO2LQ9H987 977 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 MRPS30Q9NP92 439 aaKnown RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 ACSS2Q9NR19 701 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 NDOR1Q9UHB4 597 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 GPN3Q9UHW5 284 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 PTRH2Q9Y3E5 179 aaKnown RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 A0A0J9YVX5 310 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 FAM187AA6NFU0 413 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 NDC80O14777 642 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 MED26O95402 600 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 SYF2O95926 243 aaKnown RBP13.44□□□□□ -0.26
COMMD3-208ENST00000470045 ALBP02768 609 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 C8GP07360 202 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 UMODP07911 640 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 ETF1P62495 437 aaKnown RBP13.44□□□□□ -0.26
COMMD3-208ENST00000470045 ABATP80404 500 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 TLE1Q04724 770 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 KLRB1Q12918 225 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 FASTKD3Q14CZ7 662 aaKnown RBP13.44□□□□□ -0.26
COMMD3-208ENST00000470045 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 FBXO42Q6P3S6 717 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 PAQR3Q6TCH7 311 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 ASB18Q6ZVZ8 466 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 OVCH1Q7RTY7 1134 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 TMEM151BQ8IW70 566 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 SPATA4Q8NEY3 305 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 SPSB2Q99619 263 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 TRIM4Q9C037 500 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 EPN3Q9H201 632 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 WDR54Q9H977 334 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 MOCS1Q9NZB8 636 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 STOX2Q9P2F5 926 aaPredicted RBP13.44□□□□□ -0.26
COMMD3-208ENST00000470045 ADAMTS6Q9UKP5 1117 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 PDE10AQ9Y233 779 aa13.44□□□□□ -0.26
COMMD3-208ENST00000470045 HYKKA2RU49 373 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PYCARD-AS1I3L0S3 204 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 SLC16A5O15375 505 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 WISP1O95388 367 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PIM1P11309 404 aaPredicted RBP13.43□□□□□ -0.26
COMMD3-208ENST00000470045 EZRP15311 586 aaKnown RBP13.43□□□□□ -0.26
COMMD3-208ENST00000470045 ALAS2P22557 587 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 FDXRP22570 491 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 OTX2P32243 289 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 RRADP55042 308 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 FOXL2P58012 376 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 MGAT5Q09328 741 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PDIA2Q13087 525 aaKnown RBP13.43□□□□□ -0.26
COMMD3-208ENST00000470045 NKG7Q16617 165 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 HECTD2Q5U5R9 776 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 FAM45BPQ6NSW5 357 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PPP1R32Q7Z5V6 425 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 ANKMY2Q8IV38 441 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 MYO1HQ8N1T3 1032 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 C17orf53Q8N3J3 647 aaPredicted RBP13.43□□□□□ -0.26
COMMD3-208ENST00000470045 ARHGEF39Q8N4T4 335 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 BBOF1Q8ND07 529 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 FBXO36Q8NEA4 188 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 FAM45AQ8TCE6 357 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 MCOLN3Q8TDD5 553 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.43□□□□□ -0.26
COMMD3-208ENST00000470045 NACC2Q96BF6 587 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PTERQ96BW5 349 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 LINGO1Q96FE5 620 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 C10orf90Q96M02 699 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 OR2A5Q96R48 311 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 ERP44Q9BS26 406 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 SLC25A23Q9BV35 468 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PARVBQ9HBI1 364 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
COMMD3-208ENST00000470045 WHRNQ9P202 907 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 NXT1Q9UKK6 140 aaKnown RBP13.43□□□□□ -0.26
COMMD3-208ENST00000470045 SNX24Q9Y343 169 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PCDHGB7Q9Y5F8 929 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 PSAT1Q9Y617 370 aa13.43□□□□□ -0.26
COMMD3-208ENST00000470045 VSTM2BA6NLU5 285 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 H0YGG7 62 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 RAD51CO43502 376 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 CSRP3P50461 194 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 CCL11P51671 97 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 PGDP52209 483 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 ARF3P61204 181 aaPredicted RBP13.42□□□□□ -0.26
COMMD3-208ENST00000470045 TBPL1P62380 186 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 TSTA3Q13630 321 aaPredicted RBP13.42□□□□□ -0.26
COMMD3-208ENST00000470045 PHKG1Q16816 387 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 MUM1Q2TAK8 710 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 PRMT9Q6P2P2 845 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 ZNF572Q7Z3I7 529 aaPredicted RBP13.42□□□□□ -0.26
COMMD3-208ENST00000470045 ZC3HC1Q86WB0 502 aaKnown RBP13.42□□□□□ -0.26
COMMD3-208ENST00000470045 DTWD1Q8N5C7 304 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 MVB12AQ96EY5 273 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 CCDC138Q96M89 665 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 OLFM1Q99784 485 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 MCMBPQ9BTE3 642 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 CCDC177Q9NQR7 707 aaPredicted RBP13.42□□□□□ -0.26
COMMD3-208ENST00000470045 CUEDC1Q9NWM3 386 aaPredicted RBP13.42□□□□□ -0.26
COMMD3-208ENST00000470045 UTP6Q9NYH9 597 aaKnown RBP13.42□□□□□ -0.26
COMMD3-208ENST00000470045 GRHL1Q9NZI5 618 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 ZFATQ9P243 1243 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 CTSFQ9UBX1 484 aa13.42□□□□□ -0.26
COMMD3-208ENST00000470045 VWA7Q9Y334 891 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms