RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 MRPS30Q9NP92 439 aaKnown RBP15.56■□□□□ 0.08
COL9A3-208ENST00000469802 ATP13A2Q9NQ11 1180 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 SLAMF7Q9NQ25 335 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 CDC23Q9UJX2 597 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 FBXO5Q9UKT4 447 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 DHRS7Q9Y394 339 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 COMMD10Q9Y6G5 202 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 ICE1Q9Y2F5 2266 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 ZNF839A8K0R7 811 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 H0YGG7 62 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 EIF3FO00303 357 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-208ENST00000469802 VARSP26640 1264 aaKnown RBP15.55■□□□□ 0.08
COL9A3-208ENST00000469802 RPA3P35244 121 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-208ENST00000469802 ARF3P61204 181 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-208ENST00000469802 RELAQ04206 551 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 PRDX1Q06830 199 aaKnown RBP15.55■□□□□ 0.08
COL9A3-208ENST00000469802 MUM1Q2TAK8 710 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 PRAMEF13Q5VWM6 474 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 CYHR1Q6ZMK1 362 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 SHISA6Q6ZSJ9 500 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 CALML6Q8TD86 181 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 INPP5DQ92835 1189 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 SLCO2A1Q92959 643 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 GPR21Q99679 349 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 FAM167BQ9BTA0 163 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 CCDC68Q9H2F9 335 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 ZBTB20Q9HC78 741 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-208ENST00000469802 ZNF304Q9HCX3 659 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 SEMA3GQ9NS98 782 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 C20orf96Q9NUD7 363 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-208ENST00000469802 ZC3H7BQ9UGR2 993 aaKnown RBP15.55■□□□□ 0.08
COL9A3-208ENST00000469802 TAC3Q9UHF0 121 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 SNX12Q9UMY4 172 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 B3GNT3Q9Y2A9 372 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 MAU2Q9Y6X3 613 aa15.55■□□□□ 0.08
COL9A3-208ENST00000469802 GOLGA6L10A0A0M3HER8 536 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 ALOX12BO75342 701 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 VPS26AO75436 327 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 CCNDBP1O95273 360 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 EZRP15311 586 aaKnown RBP15.54■□□□□ 0.08
COL9A3-208ENST00000469802 PGAM1P18669 254 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 TIAL1Q01085 375 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL9A3-208ENST00000469802 KLC1Q07866 573 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 CRYMQ14894 314 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 PLEKHN1Q494U1 663 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-208ENST00000469802 CRB2Q5IJ48 1285 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 IGFL2Q6UWQ7 119 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 Q6ZS92 163 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 KCNMB4Q86W47 210 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 CPNE9Q8IYJ1 553 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 IQCKQ8N0W5 287 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL9A3-208ENST00000469802 PPFIBP2Q8ND30 876 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 OR11G2Q8NGC1 345 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 STT3BQ8TCJ2 826 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 MVB12AQ96EY5 273 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 OR2A5Q96R48 311 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 MESP1Q9BRJ9 268 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 AARSD1Q9BTE6 412 aaKnown RBP15.54■□□□□ 0.08
COL9A3-208ENST00000469802 RUVBL1Q9Y265 456 aaKnown RBP15.54■□□□□ 0.08
COL9A3-208ENST00000469802 NBPF19A0A087WUL8 3843 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 CNTRLQ7Z7A1 2325 aa15.54■□□□□ 0.08
COL9A3-208ENST00000469802 A0A1W2PQ72 361 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 TCP11X1B4DZS4 312 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 SMAPO00193 183 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 HAUS5O94927 633 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 EIF2S1P05198 315 aaKnown RBP15.53■□□□□ 0.08
COL9A3-208ENST00000469802 ZGLP1P0C6A0 271 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 ERVK-10P10266 1014 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 ITGA3P26006 1051 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 IMPA1P29218 277 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 CARSP49589 748 aaKnown RBP15.53■□□□□ 0.08
COL9A3-208ENST00000469802 ABATP80404 500 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 PTK6Q13882 451 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 DSG2Q14126 1118 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 RBBP7Q16576 425 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 TUBB8Q3ZCM7 444 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 HSP90AA5PQ58FG0 334 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 PIWIL4Q7Z3Z4 852 aaKnown RBP15.53■□□□□ 0.08
COL9A3-208ENST00000469802 CSNK1A1LQ8N752 337 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 C2CD4AQ8NCU7 369 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-208ENST00000469802 TM9SF4Q92544 642 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 COL26A1Q96A83 441 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 SNRNP40Q96DI7 357 aaKnown RBP15.53■□□□□ 0.08
COL9A3-208ENST00000469802 CRB3Q9BUF7 120 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 SLC29A3Q9BZD2 475 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 KCNF1Q9H3M0 494 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 STOX2Q9P2F5 926 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-208ENST00000469802 ZNF282Q9UDV7 671 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-208ENST00000469802 PCDHGA10Q9Y5H3 936 aa15.53■□□□□ 0.08
COL9A3-208ENST00000469802 DNALI1O14645 258 aaPredicted RBP15.52■□□□□ 0.08
COL9A3-208ENST00000469802 P2RX6O15547 441 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 ZSCAN12O43309 604 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 GP1BBP13224 206 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 FBLP22087 321 aaKnown RBP15.52■□□□□ 0.08
COL9A3-208ENST00000469802 Q0VFX4 171 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 TSTA3Q13630 321 aaPredicted RBP15.52■□□□□ 0.08
COL9A3-208ENST00000469802 PPP1R7Q15435 360 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 HKDC1Q2TB90 917 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms