RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 HNRNPFP52597 415 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 CLDN8P56748 225 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 SESN3P58005 492 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 YPEL5P62699 121 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 TAP2Q03519 686 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PRKCQQ04759 706 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PWP1Q13610 501 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 DDX39BQ13838 428 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 SLBPQ14493 270 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 AASDHQ4L235 1098 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 SLC44A4Q53GD3 710 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PYCR3Q53H96 274 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 IRAK1BP1Q5VVH5 260 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 CAPRIN2Q6IMN6 1127 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 TMEM92Q6UXU6 159 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 C17orf64Q86WR6 236 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 LAS2Q8IYD9 372 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 LRRC56Q8IYG6 542 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 GOLM1Q8NBJ4 401 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 BHLHE22Q8NFJ8 381 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 FAM174AQ8TBP5 190 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 HMGB4Q8WW32 186 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 NEIL2Q969S2 332 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 VPS33AQ96AX1 596 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 TESCQ96BS2 214 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 MTFMTQ96DP5 389 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 C12orf66Q96MD2 445 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 NECAB3Q96P71 396 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 SH3GL1Q99961 368 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 ACTL8Q9H568 366 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 USP36Q9P275 1121 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 MAP10Q9P2G4 905 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 SLC23A2Q9UGH3 650 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PPT2Q9UMR5 302 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 SUFUQ9UMX1 484 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 NDRG2Q9UN36 371 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 DUSP12Q9UNI6 340 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PSMD13Q9UNM6 376 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 DMTF1Q9Y222 760 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 TDRKHQ9Y2W6 561 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 HEATR5BQ9P2D3 2071 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 TTC28Q96AY4 2481 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 ASPDHA6ND91 283 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 C9JVG2 144 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 NME4O00746 187 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 NVLO15381 856 aaKnown RBP9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SLC31A1O15431 190 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 MAP3K7O43318 606 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PRAMEF4O60810 478 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 ANP32DO95626 131 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 C8BP07358 591 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 NPPBP16860 134 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SDC1P18827 310 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PRPS1L1P21108 318 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SLC6A2P23975 617 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 IL12AP29459 219 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 TIA1P31483 386 aaKnown RBP eCLIP9.02□□□□□ -0.97
SMC1A-205ENST00000469129 S100A3P33764 101 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 HPCAL1P37235 193 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 RPL3P39023 403 aaKnown RBP9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PIK3CBP42338 1070 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 CCR5P51681 352 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 C21orf58P58505 322 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SRSF11Q05519 484 aaKnown RBP9.02□□□□□ -0.97
SMC1A-205ENST00000469129 LRRC74AQ0VAA2 488 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 KRT33BQ14525 404 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PTGR1Q14914 329 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 KIAA0040Q15053 153 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 TLR1Q15399 786 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 MAPKAPK3Q16644 382 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 MUM1Q2TAK8 710 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 UAP1L1Q3KQV9 507 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 FAM174BQ3ZCQ3 159 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 CMPK2Q5EBM0 449 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PRAMEF9Q5VWM5 478 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 NOXRED1Q6NXP6 359 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 NXPE4Q6UWF7 544 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SUSD1Q6UWL2 747 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SYT13Q7L8C5 426 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SPATA24Q86W54 205 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 DHFR2Q86XF0 187 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SYT12Q8IV01 421 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 HID1Q8IV36 788 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PGBD3Q8N328 593 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 EFCAB3Q8N7B9 438 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 CATSPER1Q8NEC5 780 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 TNIP2Q8NFZ5 429 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 OR7G3Q8NG95 312 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 OR8J3Q8NGG0 315 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 NELL1Q92832 810 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 SH3KBP1Q96B97 665 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 CXorf40BQ96DE9 158 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 TEX37Q96LM6 180 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 APOLD1Q96LR9 279 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 FERD3LQ96RJ6 166 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 AIF1LQ9BQI0 150 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 EFHD1Q9BUP0 239 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 CARS2Q9HA77 564 aaKnown RBP9.02□□□□□ -0.97
SMC1A-205ENST00000469129 IL1RL2Q9HB29 575 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms