RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 HERVK_113P63132 956 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 SRSF6Q13247 344 aaKnown RBP11.67□□□□□ -0.54
CTNS-205ENST00000467663 CLCA4Q14CN2 919 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 TGFBIQ15582 683 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 TSNQ15631 228 aaKnown RBP11.67□□□□□ -0.54
CTNS-205ENST00000467663 CFAP157Q5JU67 520 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 SNAP47Q5SQN1 464 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 MANEAQ5SRI9 462 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 DCAF12Q5T6F0 453 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 SBSNQ6UWP8 590 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 UNC5DQ6UXZ4 953 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 FAM129CQ86XR2 697 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 CRLF3Q8IUI8 442 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 TRIM48Q8IWZ4 208 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 AFAP1L2Q8N4X5 818 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 PDPRQ8NCN5 879 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 NKD1Q969G9 470 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 TEFMQ96QE5 360 aaKnown RBP11.67□□□□□ -0.54
CTNS-205ENST00000467663 CCT8L2Q96SF2 557 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 ERVK-6Q9BXR3 956 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 SPRY4Q9C004 299 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 DRC3Q9H069 523 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 C12orf65Q9H3J6 166 aaKnown RBP11.67□□□□□ -0.54
CTNS-205ENST00000467663 FBXO8Q9NRD0 319 aa11.67□□□□□ -0.54
CTNS-205ENST00000467663 MGAQ8IWI9 3026 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 NPEPPSL1A6NEC2 478 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 SUPT3HB4E1H0 165 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 CDC7O00311 574 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 KDM1AO60341 852 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 PSIP1O75475 530 aaKnown RBP11.66□□□□□ -0.54
CTNS-205ENST00000467663 SUPT3HO75486 399 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 HSD17B2P37059 387 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 HALP42357 657 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 SLC1A6P48664 564 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 ABCE1P61221 599 aaKnown RBP11.66□□□□□ -0.54
CTNS-205ENST00000467663 OCRLQ01968 901 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 C19orf57Q0VDD7 668 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 BST1Q10588 318 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 PRKAA1Q13131 559 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 RCN2Q14257 317 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 GPR18Q14330 331 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 SETDB1Q15047 1291 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 PCBP2Q15366 365 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTNS-205ENST00000467663 OR4D1Q15615 310 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 PPP1R3AQ16821 1122 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 GKAP1Q5VSY0 366 aaPredicted RBP11.66□□□□□ -0.54
CTNS-205ENST00000467663 KIAA1614Q5VZ46 1190 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 METRNLQ641Q3 311 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 ANKS6Q68DC2 871 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 TTC19Q6DKK2 380 aaPredicted RBP11.66□□□□□ -0.54
CTNS-205ENST00000467663 FAM83HQ6ZRV2 1179 aaPredicted RBP11.66□□□□□ -0.54
CTNS-205ENST00000467663 VASH2Q86V25 355 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 WDR75Q8IWA0 830 aaKnown RBP11.66□□□□□ -0.54
CTNS-205ENST00000467663 CFAP206Q8IYR0 622 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 LRRC34Q8IZ02 419 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 SPATA6LQ8N4H0 392 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 ANKS4BQ8N8V4 417 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 BCAS4Q8TDM0 211 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 STON2Q8WXE9 905 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 FAM136AQ96C01 138 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 CXorf40BQ96DE9 158 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 ZPBPQ9BS86 351 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 MECRQ9BV79 373 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 GATA5Q9BWX5 397 aaPredicted RBP11.66□□□□□ -0.54
CTNS-205ENST00000467663 TRIM55Q9BYV6 548 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 RAB33BQ9H082 229 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 ILKAPQ9H0C8 392 aaPredicted RBP11.66□□□□□ -0.54
CTNS-205ENST00000467663 WDR70Q9NW82 654 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 CD274Q9NZQ7 290 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 EPHA6Q9UF33 1036 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 HAO1Q9UJM8 370 aa11.66□□□□□ -0.54
CTNS-205ENST00000467663 IFRD1O00458 451 aaPredicted RBP11.65□□□□□ -0.54
CTNS-205ENST00000467663 NDUFAB1O14561 156 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 MLYCDO95822 493 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 TYRP1P17643 537 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 AMD1P17707 334 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 WT1P19544 449 aaPredicted RBP11.65□□□□□ -0.54
CTNS-205ENST00000467663 DRD4P21917 467 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 GGT5P36269 586 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 CAPZBP47756 277 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 KCNC1P48547 511 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 PGGT1BP53609 377 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 SEC24CP53992 1094 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 NAGLUP54802 743 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 GFERP55789 205 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 NFE2L1Q14494 772 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 RPE65Q16518 533 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 ZNF678Q5SXM1 525 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 XKR5Q6UX68 686 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 CEACAM20Q6UY09 585 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 UBE2R2Q712K3 238 aaPredicted RBP11.65□□□□□ -0.54
CTNS-205ENST00000467663 ZNF843Q8N446 348 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 PIWIL2Q8TC59 973 aaKnown RBP11.65□□□□□ -0.54
CTNS-205ENST00000467663 UBTD2Q8WUN7 234 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 SKA2Q8WVK7 121 aaPredicted RBP11.65□□□□□ -0.54
CTNS-205ENST00000467663 FAR2Q96K12 515 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 MAGEB10Q96LZ2 347 aaPredicted RBP11.65□□□□□ -0.54
CTNS-205ENST00000467663 CCDC138Q96M89 665 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 PFDN4Q9NQP4 134 aa11.65□□□□□ -0.54
CTNS-205ENST00000467663 SIDT1Q9NXL6 827 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms