RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 CSRP1P21291 193 aaKnown RBP12.77□□□□□ -0.37
PDCD11-202ENST00000466959 GRK2P25098 689 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 PRDX3P30048 256 aaKnown RBP12.77□□□□□ -0.37
PDCD11-202ENST00000466959 SERPINB5P36952 375 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 CDH13P55290 713 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 CFHR1Q03591 330 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 CLCQ05315 142 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 PRDX1Q06830 199 aaKnown RBP12.77□□□□□ -0.37
PDCD11-202ENST00000466959 PCDH1Q08174 1060 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 RCN2Q14257 317 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 SF1Q15637 639 aaKnown RBP12.77□□□□□ -0.37
PDCD11-202ENST00000466959 DEFB124Q8NES8 71 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 WDR48Q8TAF3 677 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 CKAP2Q8WWK9 683 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 SLC5A11Q8WWX8 675 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 NEIL2Q969S2 332 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 MOCOSQ96EN8 888 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 ZDHHC12Q96GR4 267 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 CNDP1Q96KN2 507 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 DRC3Q9H069 523 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 IPPKQ9H8X2 491 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 MRPS30Q9NP92 439 aaKnown RBP12.77□□□□□ -0.37
PDCD11-202ENST00000466959 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.37
PDCD11-202ENST00000466959 SH2B3Q9UQQ2 575 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 HEATR5BQ9P2D3 2071 aa12.77□□□□□ -0.37
PDCD11-202ENST00000466959 TLCD2A6NGC4 264 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 TMEM114B3SHH9 223 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 E7EQ34 232 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 NTN3O00634 580 aaPredicted RBP12.76□□□□□ -0.37
PDCD11-202ENST00000466959 OR7A17O14581 309 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 KLF11O14901 512 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 RFPL3O75679 317 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 CPNE6O95741 557 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 OTCP00480 354 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 CDH1P12830 882 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 TSPAN8P19075 237 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 SPINK2P20155 84 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 CDH3P22223 829 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 HRH2P25021 359 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 CCNG1P51959 295 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 GFERP55789 205 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 LCP2Q13094 533 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 STX3Q13277 289 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 NAA25Q14CX7 972 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 TRIP6Q15654 476 aaKnown RBP12.76□□□□□ -0.37
PDCD11-202ENST00000466959 RBBP7Q16576 425 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 KIAA1614Q5VZ46 1190 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 CES4AQ5XG92 561 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 ATG16L1Q676U5 607 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 TMEM71Q6P5X7 295 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 NXPE4Q6UWF7 544 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 SLCO4C1Q6ZQN7 724 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 USP53Q70EK8 1073 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 TRIM73Q86UV7 250 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 CARFQ8N187 725 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 TRPC4APQ8TEL6 797 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 ZNF75CPQ92670 426 aaPredicted RBP12.76□□□□□ -0.37
PDCD11-202ENST00000466959 TGM7Q96PF1 710 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 GFM1Q96RP9 751 aaKnown RBP12.76□□□□□ -0.37
PDCD11-202ENST00000466959 ZNF382Q96SR6 550 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 NUDT22Q9BRQ3 303 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 SEMA6CQ9H3T2 930 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 EHD1Q9H4M9 534 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 NOL11Q9H8H0 719 aaKnown RBP12.76□□□□□ -0.37
PDCD11-202ENST00000466959 MANSC1Q9H8J5 431 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 PELI2Q9HAT8 420 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 SLC6A20Q9NP91 592 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 C1GALT1Q9NS00 363 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 CUEDC1Q9NWM3 386 aaPredicted RBP12.76□□□□□ -0.37
PDCD11-202ENST00000466959 ANKMY1Q9P2S6 941 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 ATXN7L1Q9ULK2 861 aaPredicted RBP12.76□□□□□ -0.37
PDCD11-202ENST00000466959 PCDHGA1Q9Y5H4 931 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 KLK4Q9Y5K2 254 aa12.76□□□□□ -0.37
PDCD11-202ENST00000466959 IGKV1-8A0A0C4DH67 115 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 PCNX2A6NKB5 2137 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 D6RAR5 112 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 CASC3O15234 703 aaKnown RBP12.75□□□□□ -0.37
PDCD11-202ENST00000466959 UGDHO60701 494 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 C1GALT1C1LP0DN25 315 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 CEACAM1P13688 526 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 MDH1P40925 334 aaKnown RBP12.75□□□□□ -0.37
PDCD11-202ENST00000466959 GRIA3P42263 894 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 CASP2P42575 452 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 CCR10P46092 362 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 LSSP48449 732 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 PKNOX1P55347 436 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 ABCE1P61221 599 aaKnown RBP12.75□□□□□ -0.37
PDCD11-202ENST00000466959 YBX1P67809 324 aaKnown RBP12.75□□□□□ -0.37
PDCD11-202ENST00000466959 E2F1Q01094 437 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 IRF8Q02556 426 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 GALNT1Q10472 559 aaPredicted RBP12.75□□□□□ -0.37
PDCD11-202ENST00000466959 BST1Q10588 318 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 TRAF3Q13114 568 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 CHIT1Q13231 466 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 SPIDRQ14159 915 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 E2F2Q14209 437 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 TBCCQ15814 346 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 ATG9BQ674R7 924 aa12.75□□□□□ -0.37
PDCD11-202ENST00000466959 FAM92BQ6ZTR7 304 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms