RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SVILO95425 2214 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 H0YGG7 62 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 MYO1CO00159 1063 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 MAP2K7O14733 419 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 HPP00738 406 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 CATP04040 527 aaKnown RBP18.26■□□□□ 0.51
COL9A3-206ENST00000466532 ARF3P61204 181 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-206ENST00000466532 Q0VFX4 171 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 PRTGQ2VWP7 1150 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 ANKRD22Q5VYY1 191 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 ARMC3Q5W041 872 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 NEPROQ6NW34 567 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 COG1Q8WTW3 980 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 ZNF669Q96BR6 464 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-206ENST00000466532 CNDP1Q96KN2 507 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 C5orf34Q96MH7 638 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 PLCD4Q9BRC7 762 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 INTS10Q9NVR2 710 aaKnown RBP18.26■□□□□ 0.51
COL9A3-206ENST00000466532 C3orf18Q9UK00 162 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 SLC5A6Q9Y289 635 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 SCN3AQ9NY46 2000 aa18.26■□□□□ 0.51
COL9A3-206ENST00000466532 UNC79Q9P2D8 2635 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 SCN2AQ99250 2005 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-206ENST00000466532 WIPF3A6NGB9 483 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 PHF2O75151 1096 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 USP1O94782 785 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 LDLRP01130 860 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 KRT14P02533 472 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 ACPPP15309 386 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 MAGEA6P43360 314 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 TSFMP43897 325 aaKnown RBP18.25■□□□□ 0.51
COL9A3-206ENST00000466532 PNLIPRP1P54315 467 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 CDC16Q13042 620 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 DHX34Q14147 1143 aaKnown RBP18.25■□□□□ 0.51
COL9A3-206ENST00000466532 ZNF169Q14929 603 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-206ENST00000466532 ARHGAP19Q14CB8 494 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 VWA2Q5GFL6 755 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 ZNF470Q6ECI4 717 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 LINC00696Q6ZRV3 163 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 CAND1Q86VP6 1230 aaKnown RBP18.25■□□□□ 0.51
COL9A3-206ENST00000466532 PAQR7Q86WK9 346 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 C8orf44Q96CB5 159 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 PKP4Q99569 1192 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 ZNF160Q9HCG1 818 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 TAC3Q9UHF0 121 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 CDC14AQ9UNH5 594 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 DOPEY1Q5JWR5 2465 aa18.25■□□□□ 0.51
COL9A3-206ENST00000466532 CROCCQ5TZA2 2017 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 IGLV3-12A0A075B6K2 115 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 IGKV1-8A0A0C4DH67 115 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 FAM237BA0A1B0GVD1 139 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 CTAGE9A4FU28 777 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 ZNF839A8K0R7 811 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 CCNDBP1O95273 360 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 F7P08709 466 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-206ENST00000466532 HSD17B2P37059 387 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 CLCN7P51798 805 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 EMP3P54852 163 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 PRDX1Q06830 199 aaKnown RBP18.24■□□□□ 0.51
COL9A3-206ENST00000466532 THOC5Q13769 683 aaKnown RBP18.24■□□□□ 0.51
COL9A3-206ENST00000466532 HKDC1Q2TB90 917 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 TTLL9Q3SXZ7 439 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 ICE2Q659A1 982 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 ISLR2Q6UXK2 745 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 NEK10Q6ZWH5 1172 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 MAMDC2Q7Z304 686 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-206ENST00000466532 REXO1L1PQ8IX06 675 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 CSNK1A1LQ8N752 337 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 PPFIBP2Q8ND30 876 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 ST6GALNAC3Q8NDV1 305 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 SLC30A3Q99726 388 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 YIPF2Q9BWQ6 316 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 SYNPO2LQ9H987 977 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 ABCF3Q9NUQ8 709 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 UTP6Q9NYH9 597 aaKnown RBP18.24■□□□□ 0.51
COL9A3-206ENST00000466532 TRPC4Q9UBN4 977 aa18.24■□□□□ 0.51
COL9A3-206ENST00000466532 RUVBL1Q9Y265 456 aaKnown RBP18.24■□□□□ 0.51
COL9A3-206ENST00000466532 DIDO1Q9BTC0 2240 aaKnown RBP18.24■□□□□ 0.51
COL9A3-206ENST00000466532 FFAR3O14843 346 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 GPR42O15529 346 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 PRPF4O43172 522 aaKnown RBP eCLIP18.23■□□□□ 0.51
COL9A3-206ENST00000466532 KLHL18O94889 574 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 SYF2O95926 243 aaKnown RBP18.23■□□□□ 0.51
COL9A3-206ENST00000466532 MFAP5Q13361 173 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 CUL1Q13616 776 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 DSG2Q14126 1118 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 TLR1Q15399 786 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 ATG9BQ674R7 924 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 B3GNTL1Q67FW5 361 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-206ENST00000466532 ZNF425Q6IV72 752 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 TTC27Q6P3X3 843 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 LAPTM4BQ86VI4 370 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 KCNMB4Q86W47 210 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 DENND6AQ8IWF6 608 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 GIMAP7Q8NHV1 300 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 GRHL3Q8TE85 626 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 ZNF480Q8WV37 535 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 MVB12AQ96EY5 273 aa18.23■□□□□ 0.51
COL9A3-206ENST00000466532 CCDC68Q9H2F9 335 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms