RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TRPV2Q9Y5S1 764 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 NOTOA8MTQ0 251 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 H3BQ06 376 aaPredicted RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 M0QZ92 97 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 RFXANKO14593 260 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 AOC2O75106 756 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 SLITRK5O94991 958 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 KRT6AP02538 564 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 KRT6BP04259 564 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 C21orf33P30042 268 aaPredicted RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 CDKN2CP42773 168 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 RPS5P46782 204 aaKnown RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 RGRP47804 291 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 PRIM2P49643 509 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 RGS6P49758 472 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 RING1Q06587 406 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CACNB2Q08289 660 aaPredicted RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 MTAPQ13126 283 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 TUSC3Q13454 348 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 VEZF1Q14119 521 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 LRRC26Q2I0M4 334 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 IQCCQ4KMZ1 466 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 ARMCX4Q5H9R4 360 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 ZCCHC8Q6NZY4 707 aaKnown RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 TMC5Q6UXY8 1006 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CERS6Q6ZMG9 384 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 SPATC1Q76KD6 591 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 GPR155Q7Z3F1 870 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 VN1R5Q7Z5H4 357 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 TLK2Q86UE8 772 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 SCN4BQ8IWT1 228 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 DEPDC4Q8N2C3 294 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 DENND6BQ8NEG7 585 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 LPCAT1Q8NF37 534 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CLHC1Q8NHS4 586 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 UBE2FQ969M7 185 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 FUBP3Q96I24 572 aaKnown RBP eCLIP7.08□□□□□ -1.28
USP48-206ENST00000464577 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 DHRS1Q96LJ7 313 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 OR2A14Q96R47 310 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 MYOCQ99972 504 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 GDF15Q99988 308 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 SLC30A2Q9BRI3 323 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 KATNAL1Q9BW62 490 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 MIR1-1HGQ9H1L0 117 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 OR51E2Q9H255 320 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 RDH14Q9HBH5 336 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 TRMT13Q9NUP7 481 aaKnown RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 DKK3Q9UBP4 350 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 TBC1D24Q9ULP9 559 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 PPT2Q9UMR5 302 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 SNX6Q9UNH7 406 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 BTBD3Q9Y2F9 522 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CAB39Q9Y376 341 aaPredicted RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 LOC100506127A0A0U1RQW1 187 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 HMX3A6NHT5 357 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 A6NL46 340 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CENPXA8MT69 81 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 LOC730098B7Z3J9 87 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 KDELR3O43731 214 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 TLL1O43897 1013 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 ZNF623O75123 536 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 MFN2O95140 757 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 KCNK5O95279 499 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CHRNB1P11230 501 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 EPB42P16452 691 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 ITGA2P17301 1181 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 GPX2P18283 190 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 GABRB1P18505 474 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 MAGP20916 626 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 TACR2P21452 398 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CD72P21854 359 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 DGKAP23743 735 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 PTX3P26022 381 aaPredicted RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 HNF4AP41235 474 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 MRPS15P82914 257 aaKnown RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 SLC14A1Q13336 389 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 DUOXA1Q1HG43 343 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 GGTA1PQ4G0N0 100 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 PAN2Q504Q3 1202 aaKnown RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 C10orf62Q5T681 223 aaPredicted RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 ZNF517Q6ZMY9 492 aaPredicted RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 GPR142Q7Z601 462 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 VTCN1Q7Z7D3 282 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 RNF130Q86XS8 419 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 PTOV1Q86YD1 416 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 RAB43Q86YS6 212 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 GRPEL2Q8TAA5 225 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 TRIM63Q969Q1 353 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 ULK4Q96C45 1275 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CMTM7Q96FZ5 175 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 C7orf34Q96L11 122 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 Q96MT0 163 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 DEPDC7Q96QD5 511 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 EGFL8Q99944 293 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CENPOQ9BU64 300 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 ADGRE3Q9BY15 652 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 ACPTQ9BZG2 426 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 DDX28Q9NUL7 540 aaKnown RBP7.08□□□□□ -1.28
USP48-206ENST00000464577 MARCH2Q9P0N8 246 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms