RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MAPK15Q8TD08 544 aa5.12□□□□□ -1.59
PTCD3-205ENST00000464541 APOBEC4Q8WW27 367 aaKnown RBP5.12□□□□□ -1.59
PTCD3-205ENST00000464541 EXT2Q93063 718 aa5.12□□□□□ -1.59
PTCD3-205ENST00000464541 RMDN2Q96LZ7 410 aa5.12□□□□□ -1.59
PTCD3-205ENST00000464541 NSMCE3Q96MG7 304 aa5.12□□□□□ -1.59
PTCD3-205ENST00000464541 USP28Q96RU2 1077 aa5.12□□□□□ -1.59
PTCD3-205ENST00000464541 LPAR4Q99677 370 aa5.12□□□□□ -1.59
PTCD3-205ENST00000464541 OR10A4Q9H209 315 aa5.12□□□□□ -1.59
PTCD3-205ENST00000464541 CCDC177Q9NQR7 707 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-205ENST00000464541 CFDP1Q9UEE9 299 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-205ENST00000464541 LHCGRP22888 699 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 CYCSP99999 105 aaKnown RBP5.11□□□□□ -1.59
PTCD3-205ENST00000464541 ILF2Q12905 390 aaKnown RBP5.11□□□□□ -1.59
PTCD3-205ENST00000464541 ZNF74Q16587 644 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 KRBOX4Q5JUW0 171 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 IL17RELQ6ZVW7 336 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 ERN2Q76MJ5 926 aaKnown RBP5.11□□□□□ -1.59
PTCD3-205ENST00000464541 BTN2A1Q7KYR7 527 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 MAPK1IP1LQ8NDC0 245 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 SMAP2Q8WU79 429 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-205ENST00000464541 KCNE4Q8WWG9 221 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 WBP1Q96G27 269 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 ZNF558Q96NG5 402 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 NAA11Q9BSU3 229 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-205ENST00000464541 SYT11Q9BT88 431 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 SLC2A11Q9BYW1 496 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 DNAJC4Q9NNZ3 241 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 NFKBIL1Q9UBC1 381 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-205ENST00000464541 PPP1R3CQ9UQK1 317 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 R4GN57 208 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 KAT6BQ8WYB5 2073 aa5.11□□□□□ -1.59
PTCD3-205ENST00000464541 A0A0J9YWU9 116 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 TRBV5-5A0A0J9YX44 114 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 A0A1B0GU03 582 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 H7C423 109 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 TEX28O15482 410 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 DKC1O60832 514 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTCD3-205ENST00000464541 CDC25CP30307 473 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 HLA-FP30511 346 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 EFTUD2Q15029 972 aaKnown RBP eCLIP5.1□□□□□ -1.593e-12■■■■■ 29.4
PTCD3-205ENST00000464541 HYAL4Q2M3T9 481 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 LEKR1Q6ZMV7 388 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 STXBP4Q6ZWJ1 553 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 PTAR1Q7Z6K3 402 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-205ENST00000464541 FAM89BQ8N5H3 189 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-205ENST00000464541 SLC37A3Q8NCC5 494 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 OR7A2PQ8NGA2 310 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 VPS33AQ96AX1 596 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 ZNF689Q96CS4 500 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-205ENST00000464541 ERP27Q96DN0 273 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 BAG1Q99933 345 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-205ENST00000464541 EGLN1Q9GZT9 426 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 WWTR1Q9GZV5 400 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 FN3KQ9H479 309 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 XAB2Q9HCS7 855 aaKnown RBP5.1□□□□□ -1.59
PTCD3-205ENST00000464541 LIPGQ9Y5X9 500 aa5.1□□□□□ -1.59
PTCD3-205ENST00000464541 IGSF1Q8N6C5 1336 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 KPNA7A9QM74 516 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 ZNF195O14628 629 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 TIMM44O43615 452 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 PRKAR1AP10644 381 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 GSCP56915 257 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-205ENST00000464541 SGCGQ13326 291 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 FAM174BQ3ZCQ3 159 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 ZNF772Q68DY9 489 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-205ENST00000464541 ENPP7Q6UWV6 458 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 OR6S1Q8NH40 331 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 MRPS27Q92552 414 aaKnown RBP5.09□□□□□ -1.59
PTCD3-205ENST00000464541 SLCO2A1Q92959 643 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 SPAG5Q96R06 1193 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 TRIM15Q9C019 465 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 FZD8Q9H461 694 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 ACTL8Q9H568 366 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 ASIC3Q9UHC3 531 aa5.09□□□□□ -1.59
PTCD3-205ENST00000464541 IL16Q14005 1332 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 CYP2A7P20853 494 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 DNA2P51530 1060 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 UBASH3AP57075 661 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 DRP2Q13474 957 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 TRIM29Q14134 588 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 PTGISQ16647 500 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 GPR33Q49SQ1 333 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 C1orf141Q5JVX7 400 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 ZNF440Q8IYI8 595 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 AGAP3Q96P47 875 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 RBM4BQ9BQ04 359 aaKnown RBP5.08□□□□□ -1.6
PTCD3-205ENST00000464541 CCDC3Q9BQI4 270 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 ANKRD2Q9GZV1 360 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 SDCBP2Q9H190 292 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 POLLQ9UGP5 575 aa5.08□□□□□ -1.6
PTCD3-205ENST00000464541 A0A087WUV0 522 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 LUC7L3O95232 432 aaKnown RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 CLDN1O95832 211 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 GSRP00390 522 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 ATP1B1P05026 303 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 ACAT1P24752 427 aaKnown RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 CD27P26842 260 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 MMP12P39900 470 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms