RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 HIST1H2AHQ96KK5 128 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 RUFY1Q96T51 708 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 HIST1H2AJQ99878 128 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 H2AFJQ9BTM1 129 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 DHRS4Q9BTZ2 278 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 CCDC177Q9NQR7 707 aaPredicted RBP16.95■□□□□ 0.3
VPS52-214ENST00000463486 IGSF5Q9NSI5 407 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 CTNNAL1Q9UBT7 734 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 CROTQ9UKG9 612 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 LHX6Q9UPM6 363 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 ATRXP46100 2492 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 KALRNO60229 2985 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 CFAP46Q8IYW2 2715 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 SRPX2O60687 465 aaPredicted RBP16.94■□□□□ 0.3
VPS52-214ENST00000463486 GUCA1CO95843 209 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 CRABP2P29373 138 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 SLC26A3P40879 764 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 MAGEA12P43365 314 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 PMS2P54278 862 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 ATP6V0D1P61421 351 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 TSTA3Q13630 321 aaPredicted RBP16.94■□□□□ 0.3
VPS52-214ENST00000463486 COL9A2Q14055 689 aaPredicted RBP16.94■□□□□ 0.3
VPS52-214ENST00000463486 ZC3H12BQ5HYM0 836 aaKnown RBP16.94■□□□□ 0.3
VPS52-214ENST00000463486 ARHGAP40Q5TG30 622 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 PRAMEF13Q5VWM6 474 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 RHBDD2Q6NTF9 364 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 LCTLQ6UWM7 567 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 ADAMTSL2Q86TH1 951 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 ISCA2Q86U28 154 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 ZNF655Q8N720 491 aaPredicted RBP16.94■□□□□ 0.3
VPS52-214ENST00000463486 CT55Q8WUE5 264 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 PYCR2Q96C36 320 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 OR2A5Q96R48 311 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 PAFAH2Q99487 392 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 TRIM54Q9BYV2 358 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 SNX7Q9UNH6 387 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 PCDHGA6Q9Y5G7 932 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 AP1M2Q9Y6Q5 423 aa16.94■□□□□ 0.3
VPS52-214ENST00000463486 A0A087WUV0 522 aaPredicted RBP16.93■□□□□ 0.3
VPS52-214ENST00000463486 A0A0J9YVX5 310 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 H7BY64 318 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 ZSCAN9O15535 394 aaPredicted RBP16.93■□□□□ 0.3
VPS52-214ENST00000463486 CCNDBP1O95273 360 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 MED26O95402 600 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 C2P06681 752 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 CCNYL3P0C7X3 344 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 ITGAXP20702 1163 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 DLSTP36957 453 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 TGFBIQ15582 683 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 C18orf21Q32NC0 220 aaPredicted RBP16.93■□□□□ 0.3
VPS52-214ENST00000463486 TLDC1Q6P9B6 456 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 GPR155Q7Z3F1 870 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 KLHDC8AQ8IYD2 350 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 GPR135Q8IZ08 494 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 ARHGEF39Q8N4T4 335 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 KIAA1191Q96A73 305 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 RHBDF1Q96CC6 855 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 PRAP1Q96NZ9 151 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 GPR78Q96P69 363 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 GBP5Q96PP8 586 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 ZFYVE21Q9BQ24 234 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 SELENOSQ9BQE4 189 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 PCBD2Q9H0N5 130 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 CHST8Q9H2A9 424 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 GPN2Q9H9Y4 310 aaPredicted RBP16.93■□□□□ 0.3
VPS52-214ENST00000463486 SNX15Q9NRS6 342 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 STARD5Q9NSY2 213 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 ABCF3Q9NUQ8 709 aa16.93■□□□□ 0.3
VPS52-214ENST00000463486 MRPS18BQ9Y676 258 aaKnown RBP16.93■□□□□ 0.3
VPS52-214ENST00000463486 H0YGG7 62 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 HAT1O14929 419 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 NKX2-8O15522 239 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 TAPBPO15533 448 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 TCN2P20062 427 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 CCND1P24385 295 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 SLC6A12P48065 614 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 ARF3P61204 181 aaPredicted RBP16.92■□□□□ 0.3
VPS52-214ENST00000463486 CYP4F2P78329 520 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 CSNK1G2P78368 415 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 IRF9Q00978 393 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 DNASE1L3Q13609 305 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 CSHL1Q14406 222 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 NAA25Q14CX7 972 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 PRTGQ2VWP7 1150 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 PTCHD3Q3KNS1 767 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 WASHC2DQ5SRD0 308 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 THEMIS2Q5TEJ8 643 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 CAPN13Q6MZZ7 669 aaPredicted RBP16.92■□□□□ 0.3
VPS52-214ENST00000463486 PCSK4Q6UW60 755 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 PLD3Q8IV08 490 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 ABHD11Q8NFV4 315 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 OR4K1Q8NGD4 311 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 ATL1Q8WXF7 558 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 CLIP3Q96DZ5 547 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 MED8Q96G25 268 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 SLC22A11Q9NSA0 550 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 TMEM184CQ9NVA4 438 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 ZNF180Q9UJW8 692 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 ACOT9Q9Y305 439 aa16.92■□□□□ 0.3
VPS52-214ENST00000463486 KCNE1BA0A087WTH5 132 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms