RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 LIX1Q8N485 282 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 NAT14Q8WUY8 206 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 TFGQ92734 400 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-211ENST00000463372 ZNF285Q96NJ3 590 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 TGIF2Q9GZN2 237 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 OR52A5Q9H2C5 316 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 MMP25Q9NPA2 562 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-211ENST00000463372 ZC3H7BQ9UGR2 993 aaKnown RBP12.53□□□□□ -0.4
C9orf3-211ENST00000463372 RCOR1Q9UKL0 485 aa12.53□□□□□ -0.4
C9orf3-211ENST00000463372 BICDL2A1A5D9 508 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 ACOT7O00154 380 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 GABRA1P14867 456 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 ATP5J2P56134 94 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 PTP4A2Q12974 167 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 BECN1Q14457 450 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 CLEC12BQ2HXU8 276 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 BCL7AQ4VC05 210 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 WLSQ5T9L3 541 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 ATL3Q6DD88 541 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 KLHL10Q6JEL2 608 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 RPS19BP1Q86WX3 136 aaKnown RBP12.52□□□□□ -0.41
C9orf3-211ENST00000463372 ZNF227Q86WZ6 799 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 MEX3DQ86XN8 651 aaKnown RBP12.52□□□□□ -0.41
C9orf3-211ENST00000463372 DTX3LQ8TDB6 740 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 KIAA1191Q96A73 305 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 SRPK1Q96SB4 655 aaKnown RBP12.52□□□□□ -0.41
C9orf3-211ENST00000463372 SHARPINQ9H0F6 387 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 TDRKHQ9Y2W6 561 aaKnown RBP12.52□□□□□ -0.41
C9orf3-211ENST00000463372 FAM169AQ9Y6X4 670 aa12.52□□□□□ -0.41
C9orf3-211ENST00000463372 GLYATL1P3A0A0U1RQE8 302 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 SH3D21A4FU49 640 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 AURKAO14965 403 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 MATN3O15232 486 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 HLA-DQB2P05538 268 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 ANXA5P08758 320 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 TPP2P29144 1249 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-211ENST00000463372 PPP1R2P41236 205 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 PRKCIP41743 596 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 PPIAP62937 165 aaKnown RBP12.51□□□□□ -0.41
C9orf3-211ENST00000463372 PDCD2Q16342 344 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-211ENST00000463372 LANCL3Q6ZV70 420 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 MAATS1Q7Z4T9 603 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
C9orf3-211ENST00000463372 MAML1Q92585 1016 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 ISL2Q96A47 359 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 PEBP4Q96S96 227 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 TRIM45Q9H8W5 580 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-211ENST00000463372 STOX2Q9P2F5 926 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-211ENST00000463372 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-211ENST00000463372 MED12Q93074 2177 aa12.51□□□□□ -0.41
C9orf3-211ENST00000463372 KDM1AO60341 852 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 EIF2S1P05198 315 aaKnown RBP12.5□□□□□ -0.41
C9orf3-211ENST00000463372 MMP2P08253 660 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 ERVK-10P10266 1014 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 PAX1P15863 534 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 PEBP1P30086 187 aaKnown RBP12.5□□□□□ -0.41
C9orf3-211ENST00000463372 HMGCLP35914 325 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 HLCSP50747 726 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 GPR85P60893 370 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 CDR2Q01850 454 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 PLGLB1Q02325 96 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 C6orf52Q5T4I8 152 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 MFSD4BQ5TF39 518 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 CCDC70Q6NSX1 233 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 FBXO42Q6P3S6 717 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 OR5AR1Q8NGP9 310 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 NELFBQ8WX92 580 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 CXorf56Q9H5V9 222 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 COG4Q9H9E3 785 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 POLG2Q9UHN1 485 aa12.5□□□□□ -0.41
C9orf3-211ENST00000463372 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
C9orf3-211ENST00000463372 YLPM1P49750 1951 aaKnown RBP12.49□□□□□ -0.41
C9orf3-211ENST00000463372 FAM237AA0A1B0GTK4 181 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 FAM166BA8MTA8 275 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 SMC2O95347 1197 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 NEFLP07196 543 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 SRD5A1P18405 259 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 PSMA2P25787 234 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 PDHA2P29803 388 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 SLC26A3P40879 764 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 FAM174BQ3ZCQ3 159 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 TMEM171Q8WVE6 324 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 SLC22A18Q96BI1 424 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 SARAFQ96BY9 339 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 MVB12AQ96EY5 273 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 MMABQ96EY8 250 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-211ENST00000463372 DCUN1D1Q96GG9 259 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 TRIB3Q96RU7 358 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 CYTH2Q99418 400 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 CNPPD1Q9BV87 410 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 RBSNQ9H1K0 784 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 ZDHHC11Q9H8X9 412 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 LUC7LQ9NQ29 371 aaKnown RBP12.49□□□□□ -0.41
C9orf3-211ENST00000463372 SMOXQ9NWM0 555 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 TMEM160Q9NX00 188 aa12.49□□□□□ -0.41
C9orf3-211ENST00000463372 ASF1AQ9Y294 204 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms