RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 SLC38A9Q8NBW4 561 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 OR56A3Q8NH54 315 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 SPRTNQ9H040 489 aaPredicted RBP12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 IRAK4Q9NWZ3 460 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 NINJ2Q9NZG7 142 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 CTNNAL1Q9UBT7 734 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 FARSAQ9Y285 508 aaKnown RBP12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 OARD1Q9Y530 152 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 DSCR3O14972 297 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 CTSVO60911 334 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 CRABP2P29373 138 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 HNMTP50135 292 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 RAB10P61026 200 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 PPP1R3AQ16821 1122 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 FAM198BQ6UWH4 519 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 CEP97Q8IW35 865 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 KLHDC8AQ8IYD2 350 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 ZNF655Q8N720 491 aaPredicted RBP12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 IFT81Q8WYA0 676 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 FKBP10Q96AY3 582 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 GBP5Q96PP8 586 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 CHST8Q9H2A9 424 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 ADNPQ9H2P0 1102 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 L2HGDHQ9H9P8 463 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 KLHL20Q9Y2M5 609 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 CHD6Q8TD26 2715 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 HEATR5BQ9P2D3 2071 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 A0A1B0GX78 115 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 HCRTR1O43613 425 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 SAT1P21673 171 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 F8A1P23610 371 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 ECHS1P30084 290 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 DCDP81605 110 aaKnown RBP12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 UGT8Q16880 541 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 GARNL3Q5VVW2 1013 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 BORAQ6PGQ7 559 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 C17orf64Q86WR6 236 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 TCAIMQ8N3R3 496 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 ACAT2Q9BWD1 397 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 TUBD1Q9UJT1 453 aa12.51□□□□□ -0.41
R3HDM1-213ENST00000463230 KCNE1BA0A087WTH5 132 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 IGKV1-8A0A0C4DH67 115 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 KATNA1O75449 491 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 ANXA5P08758 320 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 RPS15AP62244 130 aaKnown RBP12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 NAE1Q13564 534 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 TSTA3Q13630 321 aaPredicted RBP12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 NCF4Q15080 339 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 TBR1Q16650 682 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 PRTGQ2VWP7 1150 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 FBXO42Q6P3S6 717 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 PPFIBP2Q8ND30 876 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 THAP4Q8WY91 577 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 ACTL8Q9H568 366 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 CUTCQ9NTM9 273 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 GPN3Q9UHW5 284 aaPredicted RBP12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 POLHQ9Y253 713 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 ASPMQ8IZT6 3477 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 SPTBP11277 2137 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 CAPN1P07384 714 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 NKAIN1Q4KMZ8 207 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 TAF1BQ53T94 588 aaPredicted RBP12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 PRAMEF17Q5VTA0 474 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 FRA10AC1Q70Z53 315 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 TAOK1Q7L7X3 1001 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 RERGQ96A58 199 aaPredicted RBP12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 MVB12AQ96EY5 273 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 UBXN10Q96LJ8 280 aa12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 CDC42EP4Q9H3Q1 356 aaKnown RBP12.5□□□□□ -0.41
R3HDM1-213ENST00000463230 NPEPPSL1A6NEC2 478 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 NKX2-8O15522 239 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 PRPF4O43172 522 aaKnown RBP eCLIP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 ALBP02768 609 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 ABHD2P08910 425 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 CCR10P46092 362 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 SERPINB9P50453 376 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 VSX2P58304 361 aaPredicted RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 MUM1Q2TAK8 710 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 SOWAHCQ53LP3 525 aaPredicted RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 WASHC2DQ5SRD0 308 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 TBC1D19Q8N5T2 526 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 ABHD11Q8NFV4 315 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 ANKRD49Q8WVL7 239 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 MED8Q96G25 268 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 IP6K3Q96PC2 410 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 OR2A5Q96R48 311 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 SARGQ9BW04 601 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 NDOR1Q9UHB4 597 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 NXT1Q9UKK6 140 aaKnown RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 CDC14AQ9UNH5 594 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 A0A087X1B8 175 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 A0A0J9YVX5 310 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 HYKKA2RU49 373 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 H0YGG7 62 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 CDC7O00311 574 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 IPO13O94829 963 aaKnown RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 CNTFP26441 200 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms