RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 ACAT2Q9BWD1 397 aa12.64□□□□□ -0.39
C9orf3-210ENST00000462125 WDR54Q9H977 334 aa12.64□□□□□ -0.39
C9orf3-210ENST00000462125 MRPS30Q9NP92 439 aaKnown RBP12.64□□□□□ -0.39
C9orf3-210ENST00000462125 TAS2R13Q9NYV9 303 aa12.64□□□□□ -0.39
C9orf3-210ENST00000462125 FER1L5A0AVI2 2057 aa12.64□□□□□ -0.39
C9orf3-210ENST00000462125 MED13Q9UHV7 2174 aa12.64□□□□□ -0.39
C9orf3-210ENST00000462125 A0A0J9YVX5 310 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 VSTM2BA6NLU5 285 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 NRP2O60462 931 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 OTX2P32243 289 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 ELK3P41970 407 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 PAFAH1B1P43034 410 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 CARSP49589 748 aaKnown RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 PGDP52209 483 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 VSX2P58304 361 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 FOXK1P85037 733 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 ATP1A4Q13733 1029 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 FRG1Q14331 258 aaKnown RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 NKG7Q16617 165 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 ICE2Q659A1 982 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 UBE2R2Q712K3 238 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 PPP1R32Q7Z5V6 425 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 MRGPREQ86SM8 312 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 HPS6Q86YV9 775 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 TMEM151BQ8IW70 566 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 TTC29Q8NA56 475 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 EEF1AKMT1Q8WVE0 214 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 PWWP2AQ96N64 755 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 OR2A5Q96R48 311 aa12.63□□□□□ -0.39
C9orf3-210ENST00000462125 SMAD5Q99717 465 aaKnown RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 WDR83Q9BRX9 315 aaKnown RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 ZC3H7BQ9UGR2 993 aaKnown RBP12.63□□□□□ -0.39
C9orf3-210ENST00000462125 PCM1Q15154 2024 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 MYO18BQ8IUG5 2567 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 PCSK5Q92824 1860 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 H0YGG7 62 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 PEX12O00623 359 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 SLC16A5O15375 505 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 TTI1O43156 1089 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 SEC31AO94979 1220 aaKnown RBP12.62□□□□□ -0.39
C9orf3-210ENST00000462125 CCNDBP1O95273 360 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 MED26O95402 600 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 MMP11P24347 488 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 IMPA1P29218 277 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 ITGA8P53708 1063 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 ARF3P61204 181 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-210ENST00000462125 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 DCAF10Q5QP82 559 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 STEAP4Q687X5 459 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 PRMT9Q6P2P2 845 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 PAQR3Q6TCH7 311 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 PIWIL4Q7Z3Z4 852 aaKnown RBP12.62□□□□□ -0.39
C9orf3-210ENST00000462125 PPFIBP2Q8ND30 876 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-210ENST00000462125 CCDC138Q96M89 665 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 NDNQ99608 321 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 SPSB2Q99619 263 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 NUDT9Q9BW91 350 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 SYNPO2LQ9H987 977 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 P4HTMQ9NXG6 502 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 C5AR2Q9P296 337 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 TAC3Q9UHF0 121 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 TRMT6Q9UJA5 497 aaKnown RBP12.62□□□□□ -0.39
C9orf3-210ENST00000462125 CORO1CQ9ULV4 474 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-210ENST00000462125 ZNF451Q9Y4E5 1061 aa12.62□□□□□ -0.39
C9orf3-210ENST00000462125 IGLV3-12A0A075B6K2 115 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 E7ESA3 106 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 AGPSO00116 658 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 SYF2O95926 243 aaKnown RBP12.61□□□□□ -0.39
C9orf3-210ENST00000462125 C8GP07360 202 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 EZRP15311 586 aaKnown RBP12.61□□□□□ -0.39
C9orf3-210ENST00000462125 HRH2P25021 359 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 OR1D4P47884 311 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 CD97P48960 835 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 RGS4P49798 205 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 CDKN2DP55273 166 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 FOXL2P58012 376 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 IGFBP7Q16270 282 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 HIF1AQ16665 826 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 MUM1Q2TAK8 710 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 RBM20Q5T481 1227 aaKnown RBP12.61□□□□□ -0.39
C9orf3-210ENST00000462125 TRMT10BQ6PF06 316 aaKnown RBP12.61□□□□□ -0.39
C9orf3-210ENST00000462125 ARHGEF39Q8N4T4 335 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 MCOLN3Q8TDD5 553 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 MVB12AQ96EY5 273 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 SNF8Q96H20 258 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 TRIM51Q9BSJ1 452 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 PARVBQ9HBI1 364 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 ZNF304Q9HCX3 659 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 TMEM184CQ9NVA4 438 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 GPR83Q9NYM4 423 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 MOCS1Q9NZB8 636 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 NXT1Q9UKK6 140 aaKnown RBP12.61□□□□□ -0.39
C9orf3-210ENST00000462125 ADAMTS6Q9UKP5 1117 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 G3BP2Q9UN86 482 aaKnown RBP12.61□□□□□ -0.39
C9orf3-210ENST00000462125 PDE10AQ9Y233 779 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 VWA7Q9Y334 891 aa12.61□□□□□ -0.39
C9orf3-210ENST00000462125 ANKRD12Q6UB98 2062 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms