RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	C8G	P07360	202 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	NR1D1	P20393	614 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	CMPK1	P30085	196 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	SPR	P35270	261 aa	Predicted RBP	12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	GABRA4	P48169	554 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	PNLIPRP1	P54315	467 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	PRAMEF17	Q5VTA0	474 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	GPR135	Q8IZ08	494 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	LRRN4CL	Q8ND94	238 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	SMPDL3A	Q92484	453 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	MIB2	Q96AX9	1013 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	CLIP3	Q96DZ5	547 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	RBBP8	Q99708	897 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	DPH2	Q9BQC3	489 aa	Predicted RBP	12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	NLN	Q9BYT8	704 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	TRIM54	Q9BYV2	358 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	ACTR5	Q9H9F9	607 aa	Predicted RBP	12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	GPAM	Q9HCL2	828 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	UTP6	Q9NYH9	597 aa	Known RBP	12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	NINJ2	Q9NZG7	142 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	ADAMTS6	Q9UKP5	1117 aa		12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	FARSA	Q9Y285	508 aa	Known RBP	12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	MTO1	Q9Y2Z2	717 aa	Known RBP	12.21	□□□□□ -0.45
FDPS-204	ENST00000461507	NUP210L	Q5VU65	1888 aa		12.21	□□□□□ -0.46
FDPS-204	ENST00000461507	MYO1C	O00159	1063 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	PHGDH	O43175	533 aa	Known RBP	12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	SLC16A8	O95907	504 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	ITGA1	P56199	1179 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	TAS2R39	P59534	338 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	SP140	Q13342	867 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	GRTP1	Q5TC63	336 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	CPZ	Q66K79	652 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	LCN10	Q6JVE6	187 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	MBOAT1	Q6ZNC8	495 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	CDHR3	Q6ZTQ4	885 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	ASB18	Q6ZVZ8	466 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	GSPT2	Q8IYD1	628 aa	Known RBP	12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	NKAP	Q8N5F7	415 aa	Known RBP	12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	ENDOV	Q8N8Q3	282 aa	Known RBP	12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	DENND1A	Q8TEH3	1009 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	ASB11	Q8WXH4	323 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	EXT2	Q93063	718 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	TCTN2	Q96GX1	697 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	EGFL8	Q99944	293 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	MENT	Q9BUN1	341 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	MRPS30	Q9NP92	439 aa	Known RBP	12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	ARL15	Q9NXU5	204 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	TAC3	Q9UHF0	121 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	SERTAD3	Q9UJW9	196 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	TCFL5	Q9UL49	500 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	IKBKG	Q9Y6K9	419 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	SHANK1	Q9Y566	2161 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	SPTAN1	Q13813	2472 aa	Known RBP	12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	RELN	P78509	3460 aa		12.2	□□□□□ -0.46
FDPS-204	ENST00000461507	ANKRD12	Q6UB98	2062 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	USP9Y	O00507	2555 aa	Predicted RBP	12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	ESPN	B1AK53	854 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507		E7EQ34	232 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	DNAJB5	O75953	348 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	OR2B3	O76000	313 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	CCNDBP1	O95273	360 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	HBQ1	P09105	142 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	STMN1	P16949	149 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	ZNF37A	P17032	561 aa	Predicted RBP	12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	HSD17B2	P37059	387 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	GRIA3	P42263	894 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	POU4F1	Q01851	419 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	ILF2	Q12905	390 aa	Known RBP	12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	NAB1	Q13506	487 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	BMPR2	Q13873	1038 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	NCF4	Q15080	339 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	ZIC1	Q15915	447 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	CYHR1	Q6ZMK1	362 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	CEP97	Q8IW35	865 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	SPATA6L	Q8N4H0	392 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	ZNF480	Q8WV37	535 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	CCDC138	Q96M89	665 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	CYTH2	Q99418	400 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	DHRS4	Q9BTZ2	278 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	ATG10	Q9H0Y0	220 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	PARVB	Q9HBI1	364 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	PRM3	Q9NNZ6	103 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	FAM60A	Q9NP50	221 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	CTNNAL1	Q9UBT7	734 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	SNX7	Q9UNH6	387 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	PDE10A	Q9Y233	779 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	PCDHGB7	Q9Y5F8	929 aa		12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	RP1L1	Q8IWN7	2480 aa	Predicted RBP	12.19	□□□□□ -0.46
FDPS-204	ENST00000461507	NCF1B	A6NI72	391 aa	Predicted RBP	12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	NCF1C	A8MVU1	366 aa	Predicted RBP	12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	POC1B-GALNT4	F8VUJ3	575 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	GFY	I3L273	518 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	CDC7	O00311	574 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	SLC16A5	O15375	505 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	EIF2S1	P05198	315 aa	Known RBP	12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	INHBA	P08476	426 aa		12.18	□□□□□ -0.46
FDPS-204	ENST00000461507	NCF1	P14598	390 aa	Predicted RBP	12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms