RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ABATP80404 500 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TAP2Q03519 686 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FASTKQ14296 549 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZNF460Q14592 562 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZC3H12BQ5HYM0 836 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ATP1A1-AS1Q5TC04 95 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 THEMIS2Q5TEJ8 643 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FIGLAQ6QHK4 219 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TMEM207Q6UWW9 146 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TRIM73Q86UV7 250 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FLVCR1-AS1Q8TAF5 88 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZNF480Q8WV37 535 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MIPEPQ99797 713 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 C17orf62Q9BQA9 187 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 DPH2Q9BQC3 489 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CCDC77Q9BR77 488 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 DERL2Q9GZP9 239 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 KLHL25Q9H0H3 589 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ACTR5Q9H9F9 607 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CAB39LQ9H9S4 337 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MRPS30Q9NP92 439 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ARL15Q9NXU5 204 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 STOX2Q9P2F5 926 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TLK1Q9UKI8 766 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 G3BP2Q9UN86 482 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ZNF462Q96JM2 2506 aa12.72□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SPTBP11277 2137 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 HEATR5BQ9P2D3 2071 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 A0A1W2PPV9 198 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 C9J4A7 227 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 POC1B-GALNT4F8VUJ3 575 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MEN1O00255 615 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 KRT38O76015 456 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CD63P08962 238 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 RAB40ALP0C0E4 278 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 HRH2P25021 359 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CNTFP26441 200 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SLC26A3P40879 764 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PGGT1BP53609 377 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 EFTUD2Q15029 972 aaKnown RBP eCLIP12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 UGT8Q16880 541 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 MROH9Q5TGP6 573 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FAM199XQ6PEV8 388 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 AGTRAPQ6RW13 159 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SUSD1Q6UWL2 747 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 FRA10AC1Q70Z53 315 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ADAMTSL2Q86TH1 951 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TBC1D1Q86TI0 1168 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 DSELQ8IZU8 1212 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TEX19Q8NA77 164 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 OR2L3Q8NG85 312 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 OR2A1Q8NGT9 310 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SLC44A1Q8WWI5 657 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 DLG3Q92796 817 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 TRIM4Q9C037 500 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 CCDC177Q9NQR7 707 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 IRAK4Q9NWZ3 460 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ANKMY1Q9P2S6 941 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 SNX7Q9UNH6 387 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PLCL2Q9UPR0 1127 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 PADI2Q9Y2J8 665 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 ACOT9Q9Y305 439 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 KLK4Q9Y5K2 254 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 AP1M2Q9Y6Q5 423 aa12.71□□□□□ -0.37
RAB11FIP3-207ENST00000461009 A0A087X1B8 175 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 EXOC1LA0A1B0GW35 172 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 KRT87PA6NCN2 255 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RIPK2O43353 540 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 GUCA1CO95843 209 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ANXA5P08758 320 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 FAM153BP0C7A2 387 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 MAGP20916 626 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IMPA1P29218 277 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TYK2P29597 1187 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CASRP41180 1078 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 GRIA3P42263 894 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CDKL1Q00532 357 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TLE1Q04724 770 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PRDX1Q06830 199 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 KLRB1Q12918 225 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 GPS2Q13227 327 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ZKSCAN8Q15776 578 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ZIC1Q15915 447 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PHKG1Q16816 387 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 FAM153CQ494X1 144 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CAPN13Q6MZZ7 669 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TCTN3Q6NUS6 607 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CDHR3Q6ZTQ4 885 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 SPNS2Q8IVW8 549 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 APLFQ8IW19 511 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 DNAJC22Q8N4W6 341 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PPFIBP2Q8ND30 876 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 UHMK1Q8TAS1 419 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ANKRD49Q8WVL7 239 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 FBXL8Q96CD0 374 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 UBXN10Q96LJ8 280 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PAFAH2Q99487 392 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ACAT2Q9BWD1 397 aa12.7□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NLNQ9BYT8 704 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms