RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GSTA3Q16772 222 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 GEN1Q17RS7 908 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ITPRIPL2Q3MIP1 535 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC25A52Q3SY17 297 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CFAP58Q5T655 872 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 DEPDC1Q5TB30 811 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 TMEM215Q68D42 235 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 MZT2BQ6NZ67 158 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FBXL22Q6P050 247 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 AADACL2Q6P093 401 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 TSSK4Q6SA08 328 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 TFAP2DQ7Z6R9 452 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 TBC1D1Q86TI0 1168 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 VPS36Q86VN1 386 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 GRAMD2AQ8IUY3 354 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CROCCP3Q8IVE0 287 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF683Q8IZ20 524 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 APCDD1Q8J025 514 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 TMEM105Q8N8V8 129 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 LILRB1Q8NHL6 650 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CEP70Q8NHQ1 597 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 MBD3L2Q8NHZ7 208 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF564Q8TBZ8 553 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF473Q8WTR7 871 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 DDI1Q8WTU0 396 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 HSPH1Q92598 858 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CAVIN3Q969G5 261 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 HIC2Q96JB3 615 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 SERPINB11Q96P15 392 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 PRMT1Q99873 361 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 NUDT22Q9BRQ3 303 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CNPY3Q9BT09 278 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 HGH1Q9BTY7 390 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 SNRNP25Q9BV90 132 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 BBS2Q9BXC9 721 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CARD9Q9H257 536 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CHODLQ9H9P2 273 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 C12orf10Q9HB07 376 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 SPHK2Q9NRA0 654 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 OLA1Q9NTK5 396 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 PARVAQ9NVD7 372 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ETNK2Q9NVF9 386 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 DNAJC17Q9NVM6 304 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FAIMQ9NVQ4 179 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ARHGEF38Q9NXL2 777 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 LSM7Q9UK45 103 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 INTS6Q9UL03 887 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 PACSIN2Q9UNF0 486 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 NEU3Q9UQ49 428 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM32AQ9Y421 112 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 HBS1LQ9Y450 684 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ARHGEF17Q96PE2 2063 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 DSPP15924 2871 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 SMG1Q96Q15 3661 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 SHROOM3Q8TF72 1996 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 LOC400499M0QZD8 3231 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 KIAA1549LQ6ZVL6 1849 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 A0A0D9SEW6 157 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 PRAMEF33A0A0G2JMD5 474 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 KANSL1LA0AUZ9 987 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 DYTNA2CJ06 578 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CTAGE15A4D2H0 777 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 K7EQS6 105 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 M0QX08 132 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 AGPSO00116 658 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 RNF103O00237 685 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 DHHO43323 396 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 TRIAP1O43715 76 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 SNAP91O60641 907 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 PRAMEF10O60809 474 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 RNASEH2AO75792 299 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 PROSCO94903 275 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 SPDEFO95238 335 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 LCA5LO95447 670 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 NFATC1O95644 943 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ESRRBO95718 433 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 FTCDO95954 541 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 APOEP02649 317 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CFIP05156 583 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 S100A6P06703 90 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CTAGE8P0CG41 777 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 HLA-EP13747 358 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 GOT1P17174 413 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CD6P30203 668 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 HLA-FP30511 346 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CCR1P32246 355 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CSKP41240 450 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 PTPN9P43378 593 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 HARS2P49590 506 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 STK19P49842 368 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 NR1H2P55055 460 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 PLOD1Q02809 727 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC25A11Q02978 314 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 OCA2Q04671 838 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 SIGLEC14Q08ET2 396 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 LMAN2Q12907 356 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 TP53BP2Q13625 1128 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 ITGA9Q13797 1035 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 CSHL1Q14406 222 aa4.74□□□□□ -1.65
ATPAF1-203ENST00000460928 HLXQ14774 488 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms