RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SNX7Q9UNH6 387 aa21.6■■□□□ 1.05
C9orf3-209ENST00000460573 PCDHGA7Q9Y5G6 932 aa21.6■■□□□ 1.05
C9orf3-209ENST00000460573 PCDHGA3Q9Y5H0 932 aa21.6■■□□□ 1.05
C9orf3-209ENST00000460573 UQCRHLA0A096LP55 91 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 A0A1W2PPM1 405 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 AGRPO00253 132 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 NVLO15381 856 aaKnown RBP21.59■■□□□ 1.05
C9orf3-209ENST00000460573 UQCRHP07919 91 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 FOLR1P15328 257 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 NPPBP16860 134 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 SLC6A12P48065 614 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 SH3BP2P78314 561 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 TUBB3Q13509 450 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 ZXDCQ2QGD7 858 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-209ENST00000460573 PTCHD3Q3KNS1 767 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 ZC3H12BQ5HYM0 836 aaKnown RBP21.59■■□□□ 1.05
C9orf3-209ENST00000460573 C17orf64Q86WR6 236 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 SPACA3Q8IXA5 215 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 ALKBH8Q96BT7 664 aaKnown RBP21.59■■□□□ 1.05
C9orf3-209ENST00000460573 PYCR2Q96C36 320 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 FCRL4Q96PJ5 515 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 OR6C1Q96RD1 312 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 DPH7Q9BTV6 452 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 KLHL25Q9H0H3 589 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 MRPL46Q9H2W6 279 aaKnown RBP21.59■■□□□ 1.05
C9orf3-209ENST00000460573 FGF21Q9NSA1 209 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 ABCF3Q9NUQ8 709 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 TMEM184CQ9NVA4 438 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 ZNF358Q9NW07 568 aa21.59■■□□□ 1.05
C9orf3-209ENST00000460573 CDRT15L2A8MXV6 281 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 GOLGA8RI6L899 631 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 MAP2K7O14733 419 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 KLK10O43240 276 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 EBLN1P0CF75 366 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 FGF5P12034 268 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 MTHFD2P13995 350 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 ETV5P41161 510 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 CCT5P48643 541 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 RELAQ04206 551 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 ZNF844Q08AG5 666 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 ZIC1Q15915 447 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 KRT71Q3SY84 523 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 FCRL6Q6DN72 434 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 CDHR3Q6ZTQ4 885 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 SH2D5Q6ZV89 423 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 THOC6Q86W42 341 aaKnown RBP21.58■■□□□ 1.05
C9orf3-209ENST00000460573 FAM20CQ8IXL6 584 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 USP7Q93009 1102 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 EXT2Q93063 718 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 UBL7Q96S82 380 aaPredicted RBP21.58■■□□□ 1.05
C9orf3-209ENST00000460573 CAPS2Q9BXY5 557 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 RARRES3Q9UL19 164 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 KCNE2Q9Y6J6 123 aa21.58■■□□□ 1.05
C9orf3-209ENST00000460573 PCM1Q15154 2024 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 PMS2P1A4D2B8 440 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 OR2A25A4D2G3 310 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 UBXN8O00124 270 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 TAPBPO15533 448 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 KLK8O60259 260 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 GLRA3O75311 464 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 STK16O75716 305 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 ALDH18A1P54886 795 aaKnown RBP21.57■■□□□ 1.04
C9orf3-209ENST00000460573 UCNP55089 124 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 TMPRSS3P57727 454 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 COL9A2Q14055 689 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-209ENST00000460573 KCNAB1Q14722 419 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 KIF26BQ2KJY2 2108 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 GPR155Q7Z3F1 870 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 TRABD2AQ86V40 505 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 PPP1R3BQ86XI6 285 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 DNAJC22Q8N4W6 341 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 UBTD2Q8WUN7 234 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 N4BP2L2Q92802 583 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-209ENST00000460573 ZNF501Q96CX3 271 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-209ENST00000460573 ZIM3Q96PE6 472 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 PLCD4Q9BRC7 762 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 SLC6A20Q9NP91 592 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 ASCL3Q9NQ33 180 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 XPR1Q9UBH6 696 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 SERTAD3Q9UJW9 196 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 PLCL2Q9UPR0 1127 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 SLC22A14Q9Y267 594 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 KLHL20Q9Y2M5 609 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 DYRK1BQ9Y463 629 aa21.57■■□□□ 1.04
C9orf3-209ENST00000460573 DYNC1I1O14576 645 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 SMIM24O75264 130 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 WDR47O94967 919 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 GFAPP14136 432 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 KRT4P19013 534 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 CD82P27701 267 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 TLE3Q04726 772 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 SLC18A2Q05940 514 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.56■■□□□ 1.04
C9orf3-209ENST00000460573 SOWAHCQ53LP3 525 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-209ENST00000460573 ZNF425Q6IV72 752 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 METTL2BQ6P1Q9 378 aaKnown RBP21.56■■□□□ 1.04
C9orf3-209ENST00000460573 OR4K3Q96R72 315 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 TMEM79Q9BSE2 394 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 CD244Q9BZW8 370 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 FAM60AQ9NP50 221 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms