RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 PTRH2Q9Y3E5 179 aaKnown RBP22■■□□□ 1.11
PTPN4-208ENST00000460289 SPTA1P02549 2419 aa22■■□□□ 1.11
PTPN4-208ENST00000460289 PCM1Q15154 2024 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 LOC105369274A0A096LPK9 316 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 LOC102723532A0A0G2JNH3 316 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 PABPN1LA6NDY0 278 aaKnown RBP21.99■■□□□ 1.11
PTPN4-208ENST00000460289 ALBP02768 609 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 EIF2S1P05198 315 aaKnown RBP21.99■■□□□ 1.11
PTPN4-208ENST00000460289 HRH2P25021 359 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 CAV1Q03135 178 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 SLC9A5Q14940 896 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 ATG14Q6ZNE5 492 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 MED25Q71SY5 747 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 STRA8Q7Z7C7 330 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 PAQR7Q86WK9 346 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 OR4N4Q8N0Y3 316 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 TMEM102Q8N9M5 508 aaPredicted RBP21.99■■□□□ 1.11
PTPN4-208ENST00000460289 OR2Y1Q8NGV0 311 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 FKBP10Q96AY3 582 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 PTERQ96BW5 349 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 PCBD2Q9H0N5 130 aa21.99■■□□□ 1.11
PTPN4-208ENST00000460289 CCDC177Q9NQR7 707 aaPredicted RBP21.99■■□□□ 1.11
PTPN4-208ENST00000460289 STOX2Q9P2F5 926 aaPredicted RBP21.99■■□□□ 1.11
PTPN4-208ENST00000460289 IGKV1-8A0A0C4DH67 115 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 J3QKU1 62 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 NRP2O60462 931 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 ATXN8OSP0DMR3 200 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 EZRP15311 586 aaKnown RBP21.98■■□□□ 1.11
PTPN4-208ENST00000460289 RRADP55042 308 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 CKAP4Q07065 602 aaKnown RBP21.98■■□□□ 1.11
PTPN4-208ENST00000460289 ZNF425Q6IV72 752 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 OVCH1Q7RTY7 1134 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 ZNF572Q7Z3I7 529 aaPredicted RBP21.98■■□□□ 1.11
PTPN4-208ENST00000460289 PTRH1Q86Y79 214 aaKnown RBP21.98■■□□□ 1.11
PTPN4-208ENST00000460289 PDLIM5Q96HC4 596 aaKnown RBP21.98■■□□□ 1.11
PTPN4-208ENST00000460289 TRIM54Q9BYV2 358 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 TRIM55Q9BYV6 548 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 SAYSD1Q9NPB0 183 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 GRHL1Q9NZI5 618 aa21.98■■□□□ 1.11
PTPN4-208ENST00000460289 H0YGG7 62 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 TXNDC9O14530 226 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 DNAJB5O75953 348 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 TSPAN12O95859 305 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 CCND1P24385 295 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 OTX2P32243 289 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 CCL11P51671 97 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 EMP3P54852 163 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 ARF3P61204 181 aaPredicted RBP21.97■■□□□ 1.11
PTPN4-208ENST00000460289 MUM1Q2TAK8 710 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 AGTRAPQ6RW13 159 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 ADCK2Q7Z695 626 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 ZC3HC1Q86WB0 502 aaKnown RBP21.97■■□□□ 1.11
PTPN4-208ENST00000460289 RERGQ96A58 199 aaPredicted RBP21.97■■□□□ 1.11
PTPN4-208ENST00000460289 NACC2Q96BF6 587 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 OLFM1Q99784 485 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 WDR54Q9H977 334 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 SLC22A11Q9NSA0 550 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 TMEM184CQ9NVA4 438 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 ANAPC2Q9UJX6 822 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 TP53TG5Q9Y2B4 290 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 PSAT1Q9Y617 370 aa21.97■■□□□ 1.11
PTPN4-208ENST00000460289 IGHEP01854 428 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 ITGAXP20702 1163 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 AP1S2P56377 157 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 TBPL1P62380 186 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 PRAMEF13Q5VWM6 474 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 CPZQ66K79 652 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 PRMT9Q6P2P2 845 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 CYS1Q717R9 158 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 CDKL2Q92772 493 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 VPS39Q96JC1 886 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 OR2A5Q96R48 311 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 PHACTR1Q9C0D0 580 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 SLC26A1Q9H2B4 701 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 CDC23Q9UJX2 597 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 G3BP2Q9UN86 482 aaKnown RBP21.96■■□□□ 1.11
PTPN4-208ENST00000460289 PCDHGA9Q9Y5G4 932 aaKnown RBP21.96■■□□□ 1.11
PTPN4-208ENST00000460289 BAHCC1Q9P281 2608 aa21.96■■□□□ 1.11
PTPN4-208ENST00000460289 H7BY64 318 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 PEX12O00623 359 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 ENO2P09104 434 aaPredicted RBP21.95■■□□□ 1.1
PTPN4-208ENST00000460289 SAT1P21673 171 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 PLTPP55058 493 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 CHAF1BQ13112 559 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 PHKG1Q16816 387 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 PRTGQ2VWP7 1150 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 CAPN12Q6ZSI9 719 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 ASB18Q6ZVZ8 466 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 NKAPQ8N5F7 415 aaKnown RBP21.95■■□□□ 1.1
PTPN4-208ENST00000460289 CSNK1A1LQ8N752 337 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 FER1L6-AS2Q96M78 137 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 C16orf45Q96MC5 204 aaPredicted RBP21.95■■□□□ 1.1
PTPN4-208ENST00000460289 PRAP1Q96NZ9 151 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 SLC25A23Q9BV35 468 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 ATG10Q9H0Y0 220 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 RHOJQ9H4E5 214 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 ZNF304Q9HCX3 659 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 ARL15Q9NXU5 204 aa21.95■■□□□ 1.1
PTPN4-208ENST00000460289 NXT1Q9UKK6 140 aaKnown RBP21.95■■□□□ 1.1
PTPN4-208ENST00000460289 CDC14AQ9UNH5 594 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms