RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 RPS3AP61247 264 aaKnown RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 OXA1LQ15070 435 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 INAVAQ3KP66 663 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 PRSS36Q5K4E3 855 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 KDM4DQ6B0I6 523 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 KIAA1841Q6NSI8 718 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 NOXRED1Q6NXP6 359 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 AHSA2Q719I0 299 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 OR52E4Q8NGH9 312 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF641Q96N77 438 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 MROQ9BYG7 248 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 DUSP21Q9H596 190 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 IL1RAPQ9NPH3 570 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 ASIC5Q9NY37 505 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 SAMHD1Q9Y3Z3 626 aaKnown RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 TRIM17Q9Y577 477 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 FAM20BO75063 409 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 SLC10A3P09131 477 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 ALOX5P09917 674 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 ACPPP15309 386 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 GJA1P17302 382 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 CRYBA2P53672 197 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 AP1S1P61966 158 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 CYP4F8P98187 520 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 PTSQ03393 145 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 LMAN2Q12907 356 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 CARTPTQ16568 116 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 CYP27C1Q4G0S4 372 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 LINC00299Q6ZSB3 139 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 CYP2U1Q7Z449 544 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 DNAJB7Q7Z6W7 309 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 MFSD4AQ8N468 514 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 BCL7BQ9BQE9 202 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 SMG9Q9H0W8 520 aaKnown RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 RDH14Q9HBH5 336 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 STARD7Q9NQZ5 370 aa13.72□□□□□ -0.21
SCFD1-203ENST00000458591 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-203ENST00000458591 CA12O43570 354 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 PCDHGA12O60330 932 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 CNOT3O75175 753 aaKnown RBP13.71□□□□□ -0.21
SCFD1-203ENST00000458591 LAMP1P11279 417 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 KDELR2P33947 212 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 CHIT1Q13231 466 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 MTA1Q13330 715 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 MAD2L1BPQ15013 274 aaPredicted RBP13.71□□□□□ -0.21
SCFD1-203ENST00000458591 VMACQ2NL98 169 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 SOWAHCQ53LP3 525 aaPredicted RBP13.71□□□□□ -0.21
SCFD1-203ENST00000458591 GPR153Q6NV75 609 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 NPAS4Q8IUM7 802 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 CADM3Q8N126 398 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 ATG16L2Q8NAA4 619 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 C2orf15Q8WU43 125 aaKnown RBP13.71□□□□□ -0.21
SCFD1-203ENST00000458591 APH1BQ8WW43 257 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 SH3KBP1Q96B97 665 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 KCNC2Q96PR1 638 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 ZNF300Q96RE9 604 aaPredicted RBP13.71□□□□□ -0.21
SCFD1-203ENST00000458591 RMND5AQ9H871 391 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 PRM3Q9NNZ6 103 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 ACOT13Q9NPJ3 140 aa13.71□□□□□ -0.21
SCFD1-203ENST00000458591 M0R129 80 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 SCN2BO60939 215 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 WBP4O75554 376 aaKnown RBP13.71□□□□□ -0.22
SCFD1-203ENST00000458591 CCNDBP1O95273 360 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 ETHE1O95571 254 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 MYCP01106 439 aaPredicted RBP13.71□□□□□ -0.22
SCFD1-203ENST00000458591 OPN1SWP03999 348 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 NTRK1P04629 796 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 FABP3P05413 133 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 SELPP16109 830 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 C21orf33P30042 268 aaPredicted RBP13.71□□□□□ -0.22
SCFD1-203ENST00000458591 KIR3DL1P43629 444 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 SMARCB1Q12824 385 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 CCSMST1Q4G0I0 132 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 CAPN13Q6MZZ7 669 aaPredicted RBP13.71□□□□□ -0.22
SCFD1-203ENST00000458591 PAGE2Q7Z2X7 111 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 ADCK1Q86TW2 530 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 P2RY8Q86VZ1 359 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 HORMAD1Q86X24 394 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 SYT12Q8IV01 421 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 DCAF4L2Q8NA75 395 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 DNASE1L2Q92874 299 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 ASIC4Q96FT7 647 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 SLC29A3Q9BZD2 475 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 RNF167Q9H6Y7 350 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 KCTD5Q9NXV2 234 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 SLCO3A1Q9UIG8 710 aa13.71□□□□□ -0.22
SCFD1-203ENST00000458591 PDE4DIPQ5VU43 2346 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 TMEM202A6NGA9 273 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 M0QX08 132 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 NSG1P42857 185 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 SERPINB10P48595 397 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 CCL23P55773 120 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 RPP38P78345 283 aaKnown RBP13.7□□□□□ -0.22
SCFD1-203ENST00000458591 SMU1Q2TAY7 513 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.224e-10■■■■□ 25.5
SCFD1-203ENST00000458591 BBS7Q8IWZ6 715 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 LILRA3Q8N6C8 439 aaPredicted RBP13.7□□□□□ -0.22
SCFD1-203ENST00000458591 HJURPQ8NCD3 748 aaPredicted RBP13.7□□□□□ -0.22
SCFD1-203ENST00000458591 DYNC2LI1Q8TCX1 351 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms