RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 MCFD2Q8NI22 146 aa19■□□□□ 0.63
CNEP1R1-203ENST00000458059 DNASE1L2Q92874 299 aa19■□□□□ 0.63
CNEP1R1-203ENST00000458059 EFCAB9A8MZ26 197 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 AQP9O43315 295 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 GALTP07902 379 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 PAX3P23760 479 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 GTF2E2P29084 291 aaKnown RBP18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 LIPAP38571 399 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 ABHD18Q0P651 414 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 TP53BP2Q13625 1128 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 CYP2U1Q7Z449 544 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 HS6ST3Q8IZP7 471 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 SETD9Q8NE22 299 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 AUTS2Q8WXX7 1259 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 NTMT1Q9BV86 223 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 TRPS1Q9UHF7 1281 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 SLC22A1O15245 554 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 HMGA1P17096 107 aaKnown RBP18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 FCGRTP55899 365 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 FKBP1BP68106 108 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 MAD2L1BPQ15013 274 aaPredicted RBP18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 NXPE1Q8N323 547 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 ZNF300Q96RE9 604 aaPredicted RBP18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 SLC32A1Q9H598 525 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 REEP1Q9H902 201 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 IL1RAPQ9NPH3 570 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 TAS2R16Q9NYV7 291 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 RAPGEFL1Q9UHV5 662 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 SAMD4AQ9UPU9 718 aaKnown RBP18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 MYO7AQ13402 2215 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 IGHA2P01877 340 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 LAMP1P11279 417 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 CTSOP43234 321 aaPredicted RBP18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 KCNC4Q03721 635 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 CHIT1Q13231 466 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 LRRC66Q68CR7 880 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 RGMBQ6NW40 437 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 NOXRED1Q6NXP6 359 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 TRAF7Q6Q0C0 670 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 OR6Q1Q8NGQ2 317 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 SPPL2AQ8TCT8 520 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 DYNC2LI1Q8TCX1 351 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 UPF1Q92900 1129 aaKnown RBP eCLIP18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 CASD1Q96PB1 797 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 P2RY13Q9BPV8 354 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 APOL4Q9BPW4 351 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 TMEM184CQ9NVA4 438 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 B3GNT3Q9Y2A9 372 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 TSC22D4Q9Y3Q8 395 aa18.99■□□□□ 0.63
CNEP1R1-203ENST00000458059 CCNDBP1O95273 360 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 DNTTP04053 509 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 CD9P21926 228 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 KDELR2P33947 212 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 CA8P35219 290 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 FAM180BQ6P0A1 224 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 YIPF6Q96EC8 236 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 DCSTAMPQ9H295 470 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 DUSP21Q9H596 190 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 TMEM161AQ9NX61 479 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 KIAA1522Q9P206 1035 aaPredicted RBP18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 CCDC88CQ9P219 2028 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 CNOT3O75175 753 aaKnown RBP18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 MYO1DO94832 1006 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 EPN2O95208 641 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 KCNK5O95279 499 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 HIST2H2ACQ16777 129 aaPredicted RBP18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 VMACQ2NL98 169 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 KDM4DQ6B0I6 523 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 P3H2Q8IVL5 708 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 SYTL1Q8IYJ3 562 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 SLC7A5P1Q8MH63 180 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 Q8N9G6 341 aaPredicted RBP18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 MED8Q96G25 268 aa18.98■□□□□ 0.63
CNEP1R1-203ENST00000458059 PABPN1LA6NDY0 278 aaKnown RBP18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 WNT9AO14904 365 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 WBP4O75554 376 aaKnown RBP18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 DLGAP3O95886 979 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 HIST1H2AGP0C0S8 130 aaPredicted RBP18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 HIST1H2ADP20671 130 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 SPAM1P38567 509 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 SERPINB10P48595 397 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 B4GALNT1Q00973 533 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 RFX4Q33E94 735 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 TTLL9Q3SXZ7 439 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 UTP15Q8TED0 518 aaKnown RBP18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 NELL1Q92832 810 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 HIST1H2AHQ96KK5 128 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 HIST1H2AJQ99878 128 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 H2AFJQ9BTM1 129 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 MAGIXQ9H6Y5 334 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 GIN1Q9NXP7 522 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 POU2F3Q9UKI9 436 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 NAALAD2Q9Y3Q0 740 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 MAGEB17A8MXT2 336 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 TTC34A8MYJ7 566 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 RRM2P31350 389 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 DNAJA1P31689 397 aaKnown RBP18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 CRISP3P54108 245 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 UGT8Q16880 541 aa18.97■□□□□ 0.63
CNEP1R1-203ENST00000458059 TCTN1Q2MV58 587 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms