RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 FBXL8Q96CD0 374 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 DNAJB9Q9UBS3 223 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 ZNF726A6NNF4 738 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 ASLP04424 464 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 ACTR1BP42025 376 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 NSG1P42857 185 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 ACTR1AP61163 376 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 C1orf189Q5VU69 101 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 SUSD1Q6UWL2 747 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 CLEC4DQ8WXI8 215 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 LRRC58Q96CX6 371 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 BLOC1S5-TXNDC5H3BN57 136 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 CYP11A1P05108 521 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 OCLNQ16625 522 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 JAGN1Q8N5M9 183 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 OR4E2Q8NGC2 313 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 CLCA3PQ9Y6N3 262 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 AFDNP55196 1824 aaKnown RBP19.18■□□□□ 0.66
SNX27-204ENST00000458013 H3BSA7 217 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 K7EPI3 171 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 ACOX3O15254 700 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 GSTT2BP0CG30 244 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 CRISP3P54108 245 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 SLC22A16Q86VW1 577 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 SMURF1Q9HCE7 757 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 GMEB2Q9UKD1 530 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 SAGE2PA6NJ88 616 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 UBXN7O94888 489 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 XRCC1P18887 633 aaPredicted RBP19.18■□□□□ 0.66
SNX27-204ENST00000458013 PDCD4Q53EL6 469 aaKnown RBP19.18■□□□□ 0.66
SNX27-204ENST00000458013 CERS6Q6ZMG9 384 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 ABHD13Q7L211 337 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 AQP11Q8NBQ7 271 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 KREMEN2Q8NCW0 462 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 CANT1Q8WVQ1 401 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 ZBED6CLQ96FA7 236 aaPredicted RBP19.18■□□□□ 0.66
SNX27-204ENST00000458013 ADAM7Q9H2U9 754 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 ITIH1P19827 911 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 SLC7A1P30825 629 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 DHPSP49366 369 aaPredicted RBP19.18■□□□□ 0.66
SNX27-204ENST00000458013 DSG2Q14126 1118 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 EIF2S3LQ2VIR3 472 aaKnown RBP19.18■□□□□ 0.66
SNX27-204ENST00000458013 DCAKDQ8WVC6 231 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 NIFKQ9BYG3 293 aaKnown RBP19.18■□□□□ 0.66
SNX27-204ENST00000458013 DHX33Q9H6R0 707 aaKnown RBP19.18■□□□□ 0.66
SNX27-204ENST00000458013 GMEB1Q9Y692 573 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 MMP20O60882 483 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 PRKD3O94806 890 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 PDGFRLQ15198 375 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 PYHIN1Q6K0P9 492 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 GOLGA7Q7Z5G4 137 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 CEP76Q8TAP6 659 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 STON2Q8WXE9 905 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 PKP2Q99959 881 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 TBL1XR1Q9BZK7 514 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 IL1RAPQ9NPH3 570 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 LGALS13Q9UHV8 139 aa19.18■□□□□ 0.66
SNX27-204ENST00000458013 KANTRA0A1W2PQU2 76 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 HAS3O00219 553 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 CCRL2O00421 344 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 MSX1P28360 303 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 OR1E2P47887 323 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 DSC3Q14574 896 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 EIPR1Q53HC9 387 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 RBM20Q5T481 1227 aaKnown RBP19.17■□□□□ 0.66
SNX27-204ENST00000458013 CCDC80Q76M96 950 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 MIPEPQ99797 713 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 WACQ9BTA9 647 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 TEX46H3BTG2 121 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 REM1O75628 298 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 CHRM1P11229 460 aaPredicted RBP19.17■□□□□ 0.66
SNX27-204ENST00000458013 ENPP2Q13822 863 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 MEP1AQ16819 746 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 KLHL22Q53GT1 634 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 C6orf183Q5T699 404 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 CLEC20AQ6ZU45 233 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 Q6ZVU0 165 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 SSX6Q7RTT6 188 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 GATSQ8NAP1 163 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 PDPRQ8NCN5 879 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 NKD2Q969F2 451 aaPredicted RBP19.17■□□□□ 0.66
SNX27-204ENST00000458013 A0A1W2PRQ8 180 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 CDRT1O95170 752 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 MPIP34949 423 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 SLC35F1Q5T1Q4 408 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 SLC15A3Q8IY34 581 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 SRFBP1Q8NEF9 429 aaKnown RBP19.17■□□□□ 0.66
SNX27-204ENST00000458013 SLC7A6OSQ96CW6 309 aaPredicted RBP19.17■□□□□ 0.66
SNX27-204ENST00000458013 AIFM2Q9BRQ8 373 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 RUVBL1Q9Y265 456 aaKnown RBP19.17■□□□□ 0.66
SNX27-204ENST00000458013 CDC123O75794 336 aaPredicted RBP19.17■□□□□ 0.66
SNX27-204ENST00000458013 PIGFQ07326 219 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 GRM2Q14416 872 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 NADK2Q4G0N4 442 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 GDPD4Q6W3E5 623 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 OR9I1Q8NGQ6 314 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 MOCOSQ96EN8 888 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 ITM2CQ9NQX7 267 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 A0A1W2PPK0 400 aa19.17■□□□□ 0.66
SNX27-204ENST00000458013 SDR16C5Q8N3Y7 309 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms