RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SOD1P00441 154 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 CDH2P19022 906 aaPredicted RBP16.15■□□□□ 0.18
CCDC43-202ENST00000457422 ITGB7P26010 798 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC43-202ENST00000457422 OR4F3Q6IEY1 312 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 ZNF765Q7L2R6 523 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 TMIEQ8NEW7 156 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 VN1R2Q8NFZ6 395 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 OR8J2Q8NGG1 315 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 PKP4Q99569 1192 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 DENND4AQ7Z401 1863 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 CCDC160A6NGH7 325 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 PRRT4C9JH25 899 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 SCN2BO60939 215 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 PRKD3O94806 890 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 CLIC3O95833 236 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 ALBP02768 609 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 HLA-EP13747 358 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 MYOGP15173 224 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 SLC6A11P48066 632 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 ELP6Q0PNE2 266 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 DYNC1I2Q13409 638 aaKnown RBP16.15■□□□□ 0.18
CCDC43-202ENST00000457422 UGT8Q16880 541 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 RBM23Q86U06 439 aaKnown RBP16.15■□□□□ 0.18
CCDC43-202ENST00000457422 SERPINA11Q86U17 422 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 TRIM74Q86UV6 250 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 ZDHHC13Q8IUH4 622 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 SYT12Q8IV01 421 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 SVOPLQ8N434 492 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 NCLNQ969V3 563 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 ARRDC3Q96B67 414 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 ZFYVE19Q96K21 471 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 THG1LQ9NWX6 298 aaKnown RBP16.15■□□□□ 0.18
CCDC43-202ENST00000457422 GULP1Q9UBP9 304 aa16.15■□□□□ 0.18
CCDC43-202ENST00000457422 LILRB5O75023 590 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 SLC16A8O95907 504 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 CST1P01037 141 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 RB1P06400 928 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 PDHA2P29803 388 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 CCR3P51677 355 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 CDH15P55291 814 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 WNT3P56703 355 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 DDX39BQ13838 428 aaKnown RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 MYBPC3Q14896 1274 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 DUOXA1Q1HG43 343 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 HNRNPA1L2Q32P51 320 aaKnown RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 FNDC3BQ53EP0 1204 aaKnown RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 OTUD3Q5T2D3 398 aaPredicted RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 OFCC1Q8IZS5 231 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 C12orf76Q8N812 135 aaPredicted RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 STARD8Q92502 1023 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 SMG7Q92540 1137 aaKnown RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 ZCCHC2Q9C0B9 1178 aaKnown RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 REXO4Q9GZR2 422 aaKnown RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 SOX17Q9H6I2 414 aaPredicted RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 FAM120CQ9NX05 1096 aaKnown RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 USE1Q9NZ43 259 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 ALPK3Q96L96 1907 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 EDDM13A0A1B0GTR0 161 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 H3BSA7 217 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 RECQL5O94762 991 aaPredicted RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 C1orf105O95561 183 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 THRBP10828 461 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 PNLIPRP1P54315 467 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 NETO1Q8TDF5 533 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 SDCCAG3Q96C92 435 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 MTERF1Q99551 399 aaKnown RBP16.14■□□□□ 0.17
CCDC43-202ENST00000457422 UTS2RQ9UKP6 389 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 MAPRE3Q9UPY8 281 aa16.14■□□□□ 0.17
CCDC43-202ENST00000457422 G3V2T6 193 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 H3BM21 787 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 K7ESM1 405 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 PLK4O00444 970 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 SEC24DO94855 1032 aaPredicted RBP16.13■□□□□ 0.17
CCDC43-202ENST00000457422 NFATC1O95644 943 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 SERPINA1P01009 418 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 ACSM2AQ08AH3 577 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 EPS8Q12929 822 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 GAB4Q2WGN9 574 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 C9orf64Q5T6V5 341 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 ACSM2BQ68CK6 577 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 DOK6Q6PKX4 331 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 ZNF551Q7Z340 670 aaPredicted RBP16.13■□□□□ 0.17
CCDC43-202ENST00000457422 GPR155Q7Z3F1 870 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 STK32CQ86UX6 486 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 EID3Q8N140 333 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 CLEC4FQ8N1N0 589 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 PGBD3Q8N328 593 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 OR8D1Q8WZ84 308 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 SGK2Q9HBY8 427 aa16.13■□□□□ 0.17
CCDC43-202ENST00000457422 EVPLLA8MZ36 301 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 MYO1DO94832 1006 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 CCNDBP1O95273 360 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 MYCLP1P12525 358 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 MAGEA2P43356 314 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 PPP2R2BQ00005 443 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 DPTQ07507 201 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 SLC14A1Q13336 389 aa16.12■□□□□ 0.17
CCDC43-202ENST00000457422 EIF4HQ15056 248 aaKnown RBP16.12■□□□□ 0.17
CCDC43-202ENST00000457422 PDE12Q6L8Q7 609 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms