RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 LAD1O00515 517 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 TGFB1I1O43294 461 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 AP5Z1O43299 807 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 KCNAB3O43448 404 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 PI15O43692 258 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 JAK2O60674 1132 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 RAMP2O60895 175 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 NDUFS6O75380 124 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 RPS6KA4O75676 772 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 OR6B1O95007 311 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZFPL1O95159 310 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 POMCP01189 267 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 SERPING1P05155 500 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 CYP21A2P08686 494 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 STSP08842 583 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 OR4E1P0C645 316 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 PLA2G4BP0C869 781 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 CPA3P15088 417 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 SRMP19623 302 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 MX1P20591 662 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 DRD5P21918 477 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 TCEA1P23193 301 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 G0S2P27469 103 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 POU1F1P28069 291 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 GSTM2P28161 218 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 APOBEC3AP31941 199 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 BSGP35613 385 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 CD79BP40259 229 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 CSNK1DP48730 415 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 CDC34P49427 236 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 CDK7P50613 346 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 BCAP31P51572 246 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 MAP2K6P52564 334 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 RPL10AP62906 217 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 HTRA4P83105 476 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 C2orf54Q08AI8 447 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 RESTQ13127 1097 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 OLIG2Q13516 323 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ADRM1Q16186 407 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 STX1AQ16623 288 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 TAZQ16635 292 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZC2HC1CQ53FD0 456 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZNF667Q5HYK9 610 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 TEX30Q5JUR7 227 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 EOGTQ5NDL2 527 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 MANEAQ5SRI9 462 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 CCNJQ5T5M9 372 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 JADE1Q6IE81 842 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 OR6B2Q6IFH4 312 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 SPOPLQ6IQ16 392 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 RFWD3Q6PCD5 774 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 KLHL35Q6PF15 583 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 TSSK4Q6SA08 328 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ARSKQ6UWY0 536 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 C4orf22Q6V702 233 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 GPRIN3Q6ZVF9 776 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 C1orf186Q6ZWK4 172 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 CHST9Q7L1S5 443 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 SLC13A5Q86YT5 568 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 NECAB1Q8N987 351 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 TTC29Q8NA56 475 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZNF248Q8NDW4 579 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 OR6Q1Q8NGQ2 317 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 OR2T3Q8NH03 318 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 NCOA7Q8NI08 942 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 SCAMP5Q8TAC9 235 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 MCOLN3Q8TDD5 553 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZNF473Q8WTR7 871 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 HTR3CQ8WXA8 447 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 MYDGFQ969H8 173 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZNF707Q96C28 371 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 FOXRED1Q96CU9 486 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 RNFT2Q96EX2 444 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 FBXL20Q96IG2 436 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 RPL10LQ96L21 214 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZNF48Q96MX3 618 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 FOXN4Q96NZ1 517 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 CITED1Q99966 193 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 MXRA8Q9BRK3 442 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZNF577Q9BSK1 485 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 HTATIP2Q9BUP3 242 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 MAGEB5Q9BZ81 275 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 SEMA4CQ9C0C4 833 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 TINAGL1Q9GZM7 467 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZMYND12Q9H0C1 365 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 DDX47Q9H0S4 455 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 MS4A5Q9H3V2 200 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 PPANQ9NQ55 473 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 PRDM8Q9NQV8 689 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 TDP1Q9NUW8 608 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 DNAJC17Q9NVM6 304 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 RNF181Q9P0P0 153 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 LRIT1Q9P2V4 623 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ZNF70Q9UC06 446 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 APOBEC3BQ9UH17 382 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 NARFQ9UHQ1 456 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 DAPK2Q9UIK4 370 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ENPP5Q9UJA9 477 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 EIF3LQ9Y262 564 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 PLEKHA6Q9Y2H5 1048 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms