RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 ZNF292O60281 2723 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 IGHV5-10-1A0A0J9YXX1 117 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 DCDC2BA2VCK2 349 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 SLC9B1P1A6NJY1 282 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 E7EQ34 232 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 H7BY64 318 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 PRICKLE3O43900 615 aaPredicted RBP13.6□□□□□ -0.23
LINC00887-204ENST00000456816 ZBTB11O95625 1053 aaPredicted RBP13.6□□□□□ -0.23
LINC00887-204ENST00000456816 MLYCDO95822 493 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 C9P02748 559 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 DHRS4L1P0CG22 281 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 ST6GAL1P15907 406 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 TSPAN8P19075 237 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 BGNP21810 368 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 HRH2P25021 359 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 GRK3P35626 688 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 LSSP48449 732 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 CCR8P51685 355 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 INHBCP55103 352 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 CDH13P55290 713 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 WDR4P57081 412 aaKnown RBP13.6□□□□□ -0.23
LINC00887-204ENST00000456816 NAA20P61599 178 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 INSM1Q01101 510 aaPredicted RBP13.6□□□□□ -0.23
LINC00887-204ENST00000456816 CLCQ05315 142 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 HES3Q5TGS1 186 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 FIGLAQ6QHK4 219 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 TMPRSS9Q7Z410 1059 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 PRSS42Q7Z5A4 293 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 TRIM42Q8IWZ5 723 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 TBC1D19Q8N5T2 526 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 C19orf47Q8N9M1 422 aaKnown RBP13.6□□□□□ -0.23
LINC00887-204ENST00000456816 FLVCR1-AS1Q8TAF5 88 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 TRPC4APQ8TEL6 797 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 ZNF483Q8TF39 744 aaPredicted RBP13.6□□□□□ -0.23
LINC00887-204ENST00000456816 N4BP2L2Q92802 583 aaPredicted RBP13.6□□□□□ -0.23
LINC00887-204ENST00000456816 PRAP1Q96NZ9 151 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 DEPDC7Q96QD5 511 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 PITPNM3Q9BZ71 974 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 STRADBQ9C0K7 418 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 DRC3Q9H069 523 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 NOL11Q9H8H0 719 aaKnown RBP13.6□□□□□ -0.23
LINC00887-204ENST00000456816 SLC6A20Q9NP91 592 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 STK38LQ9Y2H1 464 aa13.6□□□□□ -0.23
LINC00887-204ENST00000456816 IGHV5-51A0A0C4DH38 117 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 CRCPO75575 148 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 MT-CO3P00414 261 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 OTCP00480 354 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 SERPINE1P05121 402 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 THRAP10827 490 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 GRIA3P42263 894 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 CLDN6P56747 220 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 YBX1P67809 324 aaKnown RBP13.59□□□□□ -0.23
LINC00887-204ENST00000456816 MEF2AQ02078 507 aaPredicted RBP13.59□□□□□ -0.23
LINC00887-204ENST00000456816 CHIT1Q13231 466 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 CATSPEREQ5SY80 951 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 NXPE4Q6UWF7 544 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 ZNF574Q6ZN55 896 aaPredicted RBP13.59□□□□□ -0.23
LINC00887-204ENST00000456816 FRMD7Q6ZUT3 714 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 CARFQ8N187 725 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 RCBTB1Q8NDN9 531 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 MOCOSQ96EN8 888 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 TRAPPC9Q96Q05 1148 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 AIF1LQ9BQI0 150 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 GATA5Q9BWX5 397 aaPredicted RBP13.59□□□□□ -0.23
LINC00887-204ENST00000456816 C1QTNF3Q9BXJ4 246 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 PELI2Q9HAT8 420 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 PDE7BQ9NP56 450 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 TMEM184CQ9NVA4 438 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 ANKMY1Q9P2S6 941 aa13.59□□□□□ -0.23
LINC00887-204ENST00000456816 PTPRZ1P23471 2315 aaPredicted RBP13.59□□□□□ -0.23
LINC00887-204ENST00000456816 TMX2-CTNND1H3BSU7 103 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 TOX3O15405 576 aaPredicted RBP13.58□□□□□ -0.24
LINC00887-204ENST00000456816 CSO75390 466 aaKnown RBP13.58□□□□□ -0.24
LINC00887-204ENST00000456816 HSPA4LO95757 839 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 C1GALT1C1LP0DN25 315 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 FGF3P11487 239 aaPredicted RBP13.58□□□□□ -0.24
LINC00887-204ENST00000456816 CXCR2P25025 360 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 VARSP26640 1264 aaKnown RBP13.58□□□□□ -0.24
LINC00887-204ENST00000456816 CSTF2P33240 577 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC00887-204ENST00000456816 HSD11B2P80365 405 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 CYP4F3Q08477 520 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 LCP2Q13094 533 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 STX3Q13277 289 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC00887-204ENST00000456816 RCN2Q14257 317 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 SLBPQ14493 270 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC00887-204ENST00000456816 HIST2H2ACQ16777 129 aaPredicted RBP13.58□□□□□ -0.24
LINC00887-204ENST00000456816 PAGE2BQ5JRK9 111 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 ATG9BQ674R7 924 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 ATG16L1Q676U5 607 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 HIST2H2AA3Q6FI13 130 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 SLCO4C1Q6ZQN7 724 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 GPRIN3Q6ZVF9 776 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 MILR1Q7Z6M3 343 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 B3GNT8Q7Z7M8 397 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 KMT5CQ86Y97 462 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 SLITRK4Q8IW52 837 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 KRT78Q8N1N4 520 aa13.58□□□□□ -0.24
LINC00887-204ENST00000456816 DCBLD1Q8N8Z6 715 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms