RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 BTN2A2Q8WVV5 523 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 CLP1Q92989 425 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 PYURFQ96I23 114 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 DOK1Q99704 481 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 RBM4BQ9BQ04 359 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 TCF25Q9BQ70 676 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 ZSCAN5AQ9BUG6 496 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 RBM4Q9BWF3 364 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 AMBRA1Q9C0C7 1298 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 MARK1Q9P0L2 795 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 TBC1D14Q9P2M4 693 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 RFXANKO14593 260 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 GNGT2O14610 69 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 PRMT3O60678 531 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 RECQL5O94762 991 aaPredicted RBP17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 TFPTP0C1Z6 253 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 DCKP27707 260 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 KIR3DL1P43629 444 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 WNT3P56703 355 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 ABRQ12979 859 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 SLC14A1Q13336 389 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 UGT8Q16880 541 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 DUOXA1Q1HG43 343 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 ARHGAP15Q53QZ3 475 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 CES5AQ6NT32 575 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 DOK6Q6PKX4 331 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 ZNF420Q8TAQ5 688 aaPredicted RBP17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 NELL1Q92832 810 aa17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 SPATA6Q9NWH7 488 aaPredicted RBP17.81■□□□□ 0.44
SEMA3B-209ENST00000456560 A0A1W2PPW3 197 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 NOBOXO60393 691 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 CPNE6O95741 557 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 JUNBP17275 347 aaPredicted RBP17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 PCDH1Q08174 1060 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 DPY19L1Q2PZI1 675 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 XKR6Q5GH73 641 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 CHST15Q7LFX5 561 aaPredicted RBP17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 UBE2Q1Q7Z7E8 422 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 SERPINA11Q86U17 422 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 RAVER1Q8IY67 606 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 NAT16Q8N8M0 369 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 RASGEF1AQ8N9B8 481 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 BORCS5Q969J3 196 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 VPS35Q96QK1 796 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 TUBA1CQ9BQE3 449 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 EBPLQ9BY08 206 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 MTG2Q9H4K7 406 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 BOLA2-SMG1P6H3BVE0 249 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 QSOX1O00391 747 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 B4GAT1O43505 415 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 TSPAN6O43657 245 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 CBFA2T3O75081 653 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 RHOP08100 348 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 SYN1P17600 705 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 MAGEA2P43356 314 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 CTSCP53634 463 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 C21orf58P58505 322 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 SRSF11Q05519 484 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 DOC2AQ14183 400 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 RBM48Q5RL73 367 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 SPESP1Q6UW49 350 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 TMEM26Q6ZUK4 368 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 C8orf59Q8N0T1 100 aaPredicted RBP17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 TERB1Q8NA31 727 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 OR7A2PQ8NGA2 310 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 GLMNQ92990 594 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 CNDP2Q96KP4 475 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 CCDC138Q96M89 665 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 REXO4Q9GZR2 422 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 DKK3Q9UBP4 350 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 VPS29Q9UBQ0 182 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 IL36AQ9UHA7 158 aa17.8■□□□□ 0.44
SEMA3B-209ENST00000456560 NOTCH4Q99466 2003 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 SLC5A10A0PJK1 596 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 SOBPA7XYQ1 873 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 E7EQ34 232 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 KIAA0355O15063 1070 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 C1QCP02747 245 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 MAP4P27816 1152 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 VAC14Q08AM6 782 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 ZNF829Q3KNS6 432 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 ZNF805Q5CZA5 627 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 LDLRAP1Q5SW96 308 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 AGTRAPQ6RW13 159 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 SYT12Q8IV01 421 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 EID3Q8N140 333 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 PGBD3Q8N328 593 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 MRPL43Q8N983 215 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 TBC1D15Q8TC07 691 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 ATL1Q8WXF7 558 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 HDAC2Q92769 488 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 C11orf24Q96F05 449 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 ING2Q9H160 280 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 STOX2Q9P2F5 926 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 ERVK-11Q9UQG0 969 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 HCFC2Q9Y5Z7 792 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 WNT6Q9Y6F9 365 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 TRIM64BA6NI03 449 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 H0YIV9 168 aa17.79■□□□□ 0.44
SEMA3B-209ENST00000456560 CCNDBP1O95273 360 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms