RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF517Q6ZMY9 492 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 C17orf107Q6ZR85 190 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 RYBPQ8N488 228 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TTC30BQ8N4P2 665 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ARRDC4Q8NCT1 418 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF540Q8NDQ6 660 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TTC16Q8NEE8 873 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 OR11H7Q8NGC8 314 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 DNAJB8Q8NHS0 232 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PNPT1Q8TCS8 783 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM40Q8WWA1 233 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM203Q969S6 136 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CDHR1Q96JP9 859 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NSMCE2Q96MF7 247 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SAMD11Q96NU1 681 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 QRFPRQ96P65 431 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 COQ7Q99807 217 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 USB1Q9BQ65 265 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 MCOLN1Q9GZU1 580 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 IL1RAPQ9NPH3 570 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NLGN3Q9NZ94 848 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 UBA2Q9UBT2 640 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PLEKHB1Q9UF11 243 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ELF5Q9UKW6 265 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 FZD10Q9ULW2 581 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 RNF6Q9Y252 685 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NCF1BA6NI72 391 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NCF1CA8MVU1 366 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 E2F3O00716 465 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 DPYSL4O14531 572 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TOR1AO14656 332 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 DEAF1O75398 565 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC22A3O75751 556 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 EGFP01133 1207 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PGK2P07205 417 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 NCF1P14598 390 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 EPORP19235 508 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 M6PRP20645 277 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 EDNRBP24530 442 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 AQP1P29972 269 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ATICP31939 592 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SMARCB1Q12824 385 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 GRIN2CQ14957 1233 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM174BQ3ZCQ3 159 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM27D1Q5T7N8 215 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ZBTB37Q5TC79 503 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PRSS48Q7RTY5 328 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SNX20Q7Z614 316 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 CHST14Q8NCH0 376 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 C2CD4AQ8NCU7 369 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SLAIN1Q8ND83 568 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 C3orf58Q8NDZ4 430 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 MCPH1Q8NEM0 835 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 IPMKQ8NFU5 416 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 GRPEL2Q8TAA5 225 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PSKH2Q96QS6 385 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM129BQ96TA1 746 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 SPSB2Q99619 263 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 MRPL57Q9BQC6 102 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 YTHDF1Q9BYJ9 559 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 ACTR8Q9H981 624 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 DCAF13Q9NV06 445 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TLK1Q9UKI8 766 aa4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 TNPO3Q9Y5L0 923 aaKnown RBP4.41□□□□□ -1.7
DEPDC1-202ENST00000456315 PDCD11Q14690 1871 aaKnown RBP4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF98A6NK75 572 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM88BA6NKF7 163 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 PPEF1O14829 653 aaPredicted RBP4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 FABP7O15540 132 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 PCDH7O60245 1069 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 FZD6O60353 706 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 HLA-DQB2P05538 268 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 GLAP06280 429 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CAPN1P07384 714 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ALOX5P09917 674 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 C7P10643 843 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 GGT1P19440 569 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 IL10P22301 178 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ADRA1AP35348 466 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 JAK3P52333 1124 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 DNAJB13P59910 316 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC10A7Q0GE19 358 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ADIGQ0VDE8 80 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 SEPT6Q14141 434 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 GNASQ5JWF2 1037 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM180BQ6P0A1 224 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 PKN3Q6P5Z2 889 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 COMTD1Q86VU5 262 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 PTOV1Q86YD1 416 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ATP6V1C2Q8NEY4 427 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 TTC9Q92623 222 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF775Q96BV0 537 aaPredicted RBP4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ROPN1LQ96C74 230 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 MMP27Q9H306 513 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 NSMCE4AQ9NXX6 385 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF226Q9NYT6 803 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CYB5R1Q9UHQ9 305 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 MED13Q9UHV7 2174 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 J3KR12 359 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 AZIN1O14977 448 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms