RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 BNIP3Q12983 259 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 PMS2P3Q13401 168 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 NFE2L1Q14494 772 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 DHCR24Q15392 516 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 GPR153Q6NV75 609 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 FAM20CQ8IXL6 584 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 DUSP26Q9BV47 211 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF696Q9H7X3 374 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 IMP3Q9NV31 184 aaKnown RBP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 SLC25A37Q9NYZ2 338 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 ABCD2Q9UBJ2 740 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 SARDHQ9UL12 918 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 RASAL1O95294 804 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 TIMP1P01033 207 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 KLK1P06870 262 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 TFPTP0C1Z6 253 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 ADH5P11766 374 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 FUT4P22083 530 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 SLC5A2P31639 672 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 FOXM1Q08050 763 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 MESP2Q0VG99 397 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 ATP1A4Q13733 1029 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 ATP6AP1Q15904 470 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 TMEM215Q68D42 235 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 BRAT1Q6PJG6 821 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 R3HCC1LQ7Z5L2 792 aaKnown RBP11.6□□□□□ -0.55
SMPD4-213ENST00000454468 THAP5Q7Z6K1 395 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 P3H2Q8IVL5 708 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 RASGEF1AQ8N9B8 481 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF740Q8NDX6 193 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 GLMNQ92990 594 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 GLYATL1Q969I3 302 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 C12orf43Q96C57 262 aaKnown RBP11.6□□□□□ -0.55
SMPD4-213ENST00000454468 OCEL1Q9H607 264 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 REEP1Q9H902 201 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 CAPN10Q9HC96 672 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 CTPS2Q9NRF8 586 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 TBC1D14Q9P2M4 693 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 OGDHLQ9ULD0 1010 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 PCDHB3Q9Y5E6 796 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 BRWD1Q9NSI6 2320 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 ANKDD1BA6NHY2 528 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 FADS2P1A8MWK0 482 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 TIMP2P16035 220 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 CDH2P19022 906 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-213ENST00000454468 IGFBP5P24593 272 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 SLC7A9P82251 487 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 DMC1Q14565 340 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMPD4-213ENST00000454468 ANKRD33Q7Z3H0 272 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 SFTPA1Q8IWL2 248 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 ZBP1Q9H171 429 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 PAK6Q9NQU5 681 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-213ENST00000454468 HEBP1Q9NRV9 189 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 C3orf18Q9UK00 162 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 FAM32AQ9Y421 112 aaKnown RBP11.6□□□□□ -0.55
SMPD4-213ENST00000454468 GMPPBQ9Y5P6 360 aa11.6□□□□□ -0.55
SMPD4-213ENST00000454468 C5orf58C9J3I9 102 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 PCDH7O60245 1069 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF821O75541 412 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 GGT1P19440 569 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 JAK1P23458 1154 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 PRMT2P55345 433 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 NAA20P61599 178 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 CBX3Q13185 183 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 CARM1Q86X55 608 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 C10orf111Q8N326 155 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 CXorf40AQ8TE69 158 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 ASB11Q8WXH4 323 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 CARS2Q9HA77 564 aaKnown RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 RHCGQ9UBD6 479 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 TRPC4Q9UBN4 977 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 FZD4Q9ULV1 537 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 ALPPL2P10696 532 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 PRPS2P11908 318 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF182P17025 639 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 RPS3P23396 243 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 GPC1P35052 558 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 PLA2G16P53816 162 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 RPS26P62854 115 aaKnown RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 PHC1P78364 1004 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 GANABQ14697 944 aaKnown RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 C2orf27AQ580R0 203 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 TTC23Q5W5X9 447 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 CAPN13Q6MZZ7 669 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 TICAM1Q8IUC6 712 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 GLB1L3Q8NCI6 653 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 HUS1BQ8NHY5 278 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 JPH3Q8WXH2 748 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-213ENST00000454468 NEIL2Q969S2 332 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 SLC12A9Q9BXP2 914 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 ANKRD60Q9BZ19 345 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 TPT1P8Q9HAU6 139 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 PTTG2Q9NZH5 202 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 ATXN10Q9UBB4 475 aa11.59□□□□□ -0.55
SMPD4-213ENST00000454468 DNAJB9Q9UBS3 223 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms