RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ARGFXA6NJG6 315 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 MKRN2OSH3BPM6 223 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 EIF3HO15372 352 aaKnown RBP eCLIP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 CCNDBP1O95273 360 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 CD63P08962 238 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 NR1D1P20393 614 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 ALAS2P22557 587 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 FOXL2P58012 376 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 TBPL1P62380 186 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 ABATP80404 500 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 RELAQ04206 551 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 CHAF1BQ13112 559 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 PDAP1Q13442 181 aaKnown RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 SSPNQ14714 243 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 PHKG1Q16816 387 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 ZXDCQ2QGD7 858 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 LACTB2Q53H82 288 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 TMEM207Q6UWW9 146 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 MBOAT1Q6ZNC8 495 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 SLC26A11Q86WA9 606 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 PTRH1Q86Y79 214 aaKnown RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 MYO1HQ8N1T3 1032 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 ARHGEF39Q8N4T4 335 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 GPATCH11Q8N954 259 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 TTC29Q8NA56 475 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 OR2Y1Q8NGV0 311 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 MCOLN3Q8TDD5 553 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 FKBP10Q96AY3 582 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 PDLIM5Q96HC4 596 aaKnown RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 C10orf90Q96M02 699 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 CCDC138Q96M89 665 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 OR2A5Q96R48 311 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 ING2Q9H160 280 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 SLC26A1Q9H2B4 701 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 PARVBQ9HBI1 364 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 MLXIPLQ9NP71 852 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 ZNF71Q9NQZ8 489 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 CUEDC1Q9NWM3 386 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 NDOR1Q9UHB4 597 aa13.92□□□□□ -0.18
HSPG2-207ENST00000453796 GPN3Q9UHW5 284 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-207ENST00000453796 H0YGG7 62 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 J3QKU1 62 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 SLC28A2O43868 658 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 CEACAM4O75871 244 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 C1QAP02745 245 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 ALBP02768 609 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 PDGFAP04085 211 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 UMODP07911 640 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 EZRP15311 586 aaKnown RBP13.91□□□□□ -0.18
HSPG2-207ENST00000453796 IL2P60568 153 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 ARF3P61204 181 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-207ENST00000453796 TSTA3Q13630 321 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-207ENST00000453796 ATP1A4Q13733 1029 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 FAM214AQ32MH5 1076 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 OVCH1Q7RTY7 1134 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 STRA8Q7Z7C7 330 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 RAB43Q86YS6 212 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 PYROXD1Q8WU10 500 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 PHACTR1Q9C0D0 580 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 SAYSD1Q9NPB0 183 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 CCDC177Q9NQR7 707 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-207ENST00000453796 IKZF3Q9UKT9 509 aa13.91□□□□□ -0.18
HSPG2-207ENST00000453796 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
HSPG2-207ENST00000453796 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
HSPG2-207ENST00000453796 HEMK1Q9Y5R4 338 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-207ENST00000453796 FAM95CA0A1B0GW59 222 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 HYKKA2RU49 373 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 CXorf49A8MYA2 514 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-207ENST00000453796 HAT1O14929 419 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 ZNF37AP17032 561 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-207ENST00000453796 SSTR1P30872 391 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 FOLR3P41439 243 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 EMP3P54852 163 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 TRADDQ15628 312 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 NKG7Q16617 165 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 PRAMEF13Q5VWM6 474 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 AGTRAPQ6RW13 159 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 ZDHHC24Q6UX98 284 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 CYS1Q717R9 158 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 MED25Q71SY5 747 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 PRICKLE2Q7Z3G6 844 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 MRGPREQ86SM8 312 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 TMEM102Q8N9M5 508 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-207ENST00000453796 FBXO25Q8TCJ0 367 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 PTERQ96BW5 349 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 SPSB2Q99619 263 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 SGPP1Q9BX95 441 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 RHOJQ9H4E5 214 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 WDR54Q9H977 334 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 ACSS2Q9NR19 701 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 NSMCE4AQ9NXX6 385 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 CDC23Q9UJX2 597 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 ANAPC2Q9UJX6 822 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 SH2B3Q9UQQ2 575 aa13.9□□□□□ -0.18
HSPG2-207ENST00000453796 UTP11Q9Y3A2 253 aaKnown RBP13.9□□□□□ -0.18
HSPG2-207ENST00000453796 VSTM2BA6NLU5 285 aa13.89□□□□□ -0.19
HSPG2-207ENST00000453796 PIAS1O75925 651 aa13.89□□□□□ -0.19
HSPG2-207ENST00000453796 WISP3O95389 354 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms