RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 J3QKU1 62 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 RIPK2O43353 540 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 CPNE3O75131 537 aaKnown RBP19.13■□□□□ 0.65
COL9A3-202ENST00000452372 OR2B3O76000 313 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 GUCA1CO95843 209 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 ITGB2P05107 769 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 INHBAP08476 426 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 SLC35E2BP0CK96 405 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 CD1DP15813 335 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 SLC26A3P40879 764 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 TBPL1P62380 186 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 CDKL1Q00532 357 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 NAE1Q13564 534 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 BMPR2Q13873 1038 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 TBR1Q16650 682 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 THEMIS2Q5TEJ8 643 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 PRAMEF17Q5VTA0 474 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 CCDC91Q7Z6B0 441 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 GSPT2Q8IYD1 628 aaKnown RBP19.13■□□□□ 0.65
COL9A3-202ENST00000452372 SLC38A9Q8NBW4 561 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 OR56A3Q8NH54 315 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.13■□□□□ 0.65
COL9A3-202ENST00000452372 PAFAH2Q99487 392 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 SGPP1Q9BX95 441 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 SPRTNQ9H040 489 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-202ENST00000452372 ANKZF1Q9H8Y5 726 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 SLC6A20Q9NP91 592 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 ABCF3Q9NUQ8 709 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 PADI1Q9ULC6 663 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 IKBKGQ9Y6K9 419 aa19.13■□□□□ 0.65
COL9A3-202ENST00000452372 IGKV1-8A0A0C4DH67 115 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 CTSVO60911 334 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 CCNYL3P0C7X3 344 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 STAT5AP42229 794 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 MSH2P43246 934 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 SERPINB9P50453 376 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 CSRP3P50461 194 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 CSHL1Q14406 222 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 PRAMEF13Q5VWM6 474 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 ZNF425Q6IV72 752 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 CAPN13Q6MZZ7 669 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-202ENST00000452372 LRFN5Q96NI6 719 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 PLCD4Q9BRC7 762 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 UNKQ9C0B0 810 aaKnown RBP19.12■□□□□ 0.65
COL9A3-202ENST00000452372 ACTR5Q9H9F9 607 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-202ENST00000452372 ZNF180Q9UJW8 692 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 SNX7Q9UNH6 387 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 ACOT9Q9Y305 439 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 AP1M2Q9Y6Q5 423 aa19.12■□□□□ 0.65
COL9A3-202ENST00000452372 LOC101059948A0A1B0GTJ6 334 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 POC1B-GALNT4F8VUJ3 575 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 ZNF749O43361 778 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 SRPX2O60687 465 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-202ENST00000452372 C2P06681 752 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 CTSBP07858 339 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 ANXA5P08758 320 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 HBQ1P09105 142 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 NPPBP16860 134 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 HRH2P25021 359 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 RELAQ04206 551 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 SLC29A2Q14542 456 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 FBXO42Q6P3S6 717 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 TLDC1Q6P9B6 456 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 LCTLQ6UWM7 567 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 FRA10AC1Q70Z53 315 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 TBC1D1Q86TI0 1168 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-202ENST00000452372 PAQR7Q86WK9 346 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 KIAA1191Q96A73 305 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 ZNF285Q96NJ3 590 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 LHX9Q9NQ69 397 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 ENAMQ9NRM1 1142 aa19.11■□□□□ 0.65
COL9A3-202ENST00000452372 MDC1Q14676 2089 aaKnown RBP19.1■□□□□ 0.65
COL9A3-202ENST00000452372 A0A087X1B8 175 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 EXOC1LA0A1B0GW35 172 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 NRP2O60462 931 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 KRT38O76015 456 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 KLK3P07288 261 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-202ENST00000452372 LIFP15018 202 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 CNTFP26441 200 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 TYK2P29597 1187 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 RORAP35398 523 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 GMPRP36959 345 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 HNMTP50135 292 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 DLG1Q12959 904 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 GPS2Q13227 327 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 TGFBIQ15582 683 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 TCTE1Q5JU00 501 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 ZNF517Q6ZMY9 492 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-202ENST00000452372 RNF44Q7L0R7 432 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 DCAKDQ8WVC6 231 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 KIAA1143Q96AT1 154 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-202ENST00000452372 ALKBH8Q96BT7 664 aaKnown RBP19.1■□□□□ 0.65
COL9A3-202ENST00000452372 PTERQ96BW5 349 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 PYCR2Q96C36 320 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 CLIP3Q96DZ5 547 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 SELENOSQ9BQE4 189 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 DHRS4Q9BTZ2 278 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 EFHD1Q9BUP0 239 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 EPB41L4BQ9H329 900 aa19.1■□□□□ 0.65
COL9A3-202ENST00000452372 AKIRIN1Q9H9L7 192 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms