RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 NRROSQ86YC3 692 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 TREML1Q86YW5 311 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 RBM12BQ8IXT5 1001 aaKnown RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 LRRC56Q8IYG6 542 aaPredicted RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 SDR16C5Q8N3Y7 309 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 SFRP1Q8N474 314 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 LMNTD1Q8N9Z9 388 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 DTWD2Q8NBA8 298 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 HMGCLL1Q8TB92 370 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 GAB3Q8WWW8 586 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 CMTM7Q96FZ5 175 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 CENPKQ9BS16 269 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 MRPL1Q9BYD6 325 aaKnown RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 PITHD1Q9GZP4 211 aaPredicted RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 FARSBQ9NSD9 589 aaKnown RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 NDE1Q9NXR1 346 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 AHSPQ9NZD4 102 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 ZNF624Q9P2J8 865 aaPredicted RBP9.35□□□□□ -0.91
RFC4-210ENST00000449502 CPNE7Q9UBL6 633 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 ICKQ9UPZ9 632 aa9.35□□□□□ -0.91
RFC4-210ENST00000449502 PIPSLA2A3N6 862 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 GSAPA4D1B5 854 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 ANKDD1BA6NHY2 528 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 LSM1O15116 133 aaKnown RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 SLC22A3O75751 556 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 EML2O95834 649 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 SNRPB2P08579 225 aaKnown RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 CHRM5P08912 532 aaPredicted RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 XRCC1P18887 633 aaPredicted RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 SLC19A1P41440 591 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 DPP6P42658 865 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 ARRB1P49407 418 aaPredicted RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 NCALDP61601 193 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 GRIK2Q13002 908 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 PDCD4Q53EL6 469 aaKnown RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 IL23RQ5VWK5 629 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 ICE2Q659A1 982 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 KLHL35Q6PF15 583 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 C16orf89Q6UX73 402 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 TMIGD1Q6UXZ0 262 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 Q6ZSR9 355 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 ZFAND4Q86XD8 727 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.34□□□□□ -0.91
RFC4-210ENST00000449502 KIF2BQ8N4N8 673 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 POU5F2Q8N7G0 328 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 TTLQ8NG68 377 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 OR7G3Q8NG95 312 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 OR2T11Q8NH01 316 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 OR10G6Q8NH81 332 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 JPH3Q8WXH2 748 aaPredicted RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 WDR34Q96EX3 536 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 MTERF1Q99551 399 aaKnown RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 SERPINI1Q99574 410 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 BTBD10Q9BSF8 475 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 C1orf50Q9BV19 199 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 SLC25A23Q9BV35 468 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 LRRC61Q9BV99 259 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 ACPTQ9BZG2 426 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 LRMDAQ9H2I8 198 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 EFCAB1Q9HAE3 211 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 BRF2Q9HAW0 419 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 AIG1Q9NVV5 245 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 GEMIN8Q9NWZ8 242 aaKnown RBP9.34□□□□□ -0.91
RFC4-210ENST00000449502 CCDC167Q9P0B6 97 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 VPS29Q9UBQ0 182 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 GIMAP2Q9UG22 337 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 KLF15Q9UIH9 416 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 FBXO4Q9UKT5 387 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 SNX7Q9UNH6 387 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 TMED5Q9Y3A6 229 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 BRWD1Q9NSI6 2320 aa9.34□□□□□ -0.91
RFC4-210ENST00000449502 PRAMEF33A0A0G2JMD5 474 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 A0A1B0GVT2 93 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 SERTM1A2A2V5 107 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 FAM221BA6H8Z2 402 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 A6NCN8 305 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 OR6C74A6NCV1 312 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 C2orf74A8MZ97 194 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 H7BY64 318 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 FOXE1O00358 373 aaPredicted RBP9.33□□□□□ -0.92
RFC4-210ENST00000449502 NR5A2O00482 541 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 AIM2O14862 343 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 ANGPT2O15123 496 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 ZW10O43264 779 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 AQP9O43315 295 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 CELA2BP08218 269 aaPredicted RBP9.33□□□□□ -0.92
RFC4-210ENST00000449502 ALDOCP09972 364 aaKnown RBP9.33□□□□□ -0.92
RFC4-210ENST00000449502 PRR35P0CG20 571 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 T-ENOLP0DO92 83 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 PRPS2P11908 318 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 AMD1P17707 334 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 CNR2P34972 360 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 PIK3CBP42338 1070 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 ACADVLP49748 655 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 NUDT2P50583 147 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 CORO7P57737 925 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 RPS13P62277 151 aaKnown RBP9.33□□□□□ -0.92
RFC4-210ENST00000449502 HHEXQ03014 270 aa9.33□□□□□ -0.92
RFC4-210ENST00000449502 PRDX1Q06830 199 aaKnown RBP9.33□□□□□ -0.92
RFC4-210ENST00000449502 ACSM2AQ08AH3 577 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms