RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 STAMBPO95630 424 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 C1GALT1C1LP0DN25 315 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 PHC1P78364 1004 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 SMAD4Q13485 552 aaKnown RBP17.1■□□□□ 0.33
LMNA-208ENST00000448611 TSTA3Q13630 321 aaPredicted RBP17.1■□□□□ 0.33
LMNA-208ENST00000448611 FXNQ16595 210 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 CAPRIN2Q6IMN6 1127 aaKnown RBP17.1■□□□□ 0.33
LMNA-208ENST00000448611 LCN8Q6JVE9 175 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 CHST15Q7LFX5 561 aaPredicted RBP17.1■□□□□ 0.33
LMNA-208ENST00000448611 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 SETD7Q8WTS6 366 aaKnown RBP17.1■□□□□ 0.33
LMNA-208ENST00000448611 SLC5A11Q8WWX8 675 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 TESCQ96BS2 214 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 METTL2AQ96IZ6 378 aaKnown RBP17.1■□□□□ 0.33
LMNA-208ENST00000448611 EGLN2Q96KS0 407 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 LRGUKQ96M69 825 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 OR52E6Q96RD3 313 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 PKP2Q99959 881 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 TIMM29Q9BSF4 260 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 KLHL4Q9C0H6 718 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 VCX3BQ9H321 246 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 RMI1Q9H9A7 625 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 FZD3Q9NPG1 666 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 GEMIN8Q9NWZ8 242 aaKnown RBP17.1■□□□□ 0.33
LMNA-208ENST00000448611 VAPAQ9P0L0 249 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 ACSL5Q9ULC5 683 aa17.1■□□□□ 0.33
LMNA-208ENST00000448611 CFAP20Q9Y6A4 193 aaKnown RBP17.1■□□□□ 0.33
LMNA-208ENST00000448611 AQP12BA6NM10 295 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 MBTPS2O43462 519 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 PI15O43692 258 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 RPN2P04844 631 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 PCNAP12004 261 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 ACP5P13686 325 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 SLC7A1P30825 629 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 CLCNKAP51800 687 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 SELPLGQ14242 412 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 SLBPQ14493 270 aaKnown RBP eCLIP17.09■□□□□ 0.33
LMNA-208ENST00000448611 LRRC36Q1X8D7 754 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 LCTLQ6UWM7 567 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 AQP12AQ8IXF9 295 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 LAS2Q8IYD9 372 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 OR8J3Q8NGG0 315 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 ASB12Q8WXK4 309 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 REPS1Q96D71 796 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 KCTD14Q9BQ13 255 aaPredicted RBP17.09■□□□□ 0.33
LMNA-208ENST00000448611 MENTQ9BUN1 341 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 APOOQ9BUR5 198 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 EBPLQ9BY08 206 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 BTBD1Q9H0C5 482 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 MUC13Q9H3R2 512 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 WDR37Q9Y2I8 494 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 TDRKHQ9Y2W6 561 aaKnown RBP17.09■□□□□ 0.33
LMNA-208ENST00000448611 AP4S1Q9Y587 144 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 KANSL1LA0AUZ9 987 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 PRR19A6NJB7 356 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 ARPC2O15144 300 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 SLC35G4P0C7Q5 338 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 RPL10P27635 214 aaKnown RBP17.09■□□□□ 0.33
LMNA-208ENST00000448611 GRIA3P42263 894 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 PLIN5Q00G26 463 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 TFF2Q03403 129 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 ARHGAP19Q14CB8 494 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 PRAMEF14Q5SWL7 426 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 IRAK1BP1Q5VVH5 260 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 PRAMEF13Q5VWM6 474 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 NXPE4Q6UWF7 544 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 TMEM92Q6UXU6 159 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 FAM124AQ86V42 546 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 IFNEQ86WN2 208 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 PDSS2Q86YH6 399 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 MSRB3Q8IXL7 192 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 RPLP0P6Q8NHW5 317 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 TRIM15Q9C019 465 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 PRDM6Q9NQX0 595 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 RUVBL1Q9Y265 456 aaKnown RBP17.09■□□□□ 0.33
LMNA-208ENST00000448611 NCKAP1Q9Y2A7 1128 aa17.09■□□□□ 0.33
LMNA-208ENST00000448611 NUMA1Q14980 2115 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 PIPSLA2A3N6 862 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 SLC31A1O15431 190 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 DFNA5O60443 496 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 CAPNS1P04632 268 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 NDUFV2P19404 249 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 HTR1EP28566 365 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 MTPNP58546 118 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 PYCR3Q53H96 274 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 SFT2D3Q587I9 215 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 PAGE2BQ5JRK9 111 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 C10orf62Q5T681 223 aaPredicted RBP17.08■□□□□ 0.33
LMNA-208ENST00000448611 SPPL2CQ8IUH8 684 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 TBC1D21Q8IYX1 336 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 TMEM102Q8N9M5 508 aaPredicted RBP17.08■□□□□ 0.33
LMNA-208ENST00000448611 NRTNQ99748 197 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 SPNS1Q9H2V7 528 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 TRIT1Q9H3H1 467 aaKnown RBP17.08■□□□□ 0.33
LMNA-208ENST00000448611 CD93Q9NPY3 652 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 SERHLQ9NQF3 203 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 SLC25A37Q9NYZ2 338 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 MAN2B2Q9Y2E5 1009 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 LRCH1Q9Y2L9 728 aa17.08■□□□□ 0.33
LMNA-208ENST00000448611 SNX13Q9Y5W8 968 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms