RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NXNL1Q96CM4 212 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 MTBPQ96DY7 904 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 ZFYVE21Q9BQ24 234 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 SELENOSQ9BQE4 189 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 PLCD4Q9BRC7 762 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 SGPP1Q9BX95 441 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 ALG9Q9H6U8 611 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 SLC6A20Q9NP91 592 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 CD274Q9NZQ7 290 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 PSMC3IPQ9P2W1 217 aaPredicted RBP13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 FETUBQ9UGM5 382 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 PCDHB3Q9Y5E6 796 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 AP1M2Q9Y6Q5 423 aa13.46□□□□□ -0.25
GTF3C3-206ENST00000448539 A0A0J9YVX5 310 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 SYCE1LA8MT33 242 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 KLHL2O95198 593 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 DLGAP3O95886 979 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 KLK3P07288 261 aaPredicted RBP13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 TUBBP07437 444 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 ITPKBP27987 946 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 GRK3P35626 688 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 GABRA4P48169 554 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 ABHD18Q0P651 414 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 DLG1Q12959 904 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 ACAP2Q15057 778 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 OR4D1Q15615 310 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 PTCHD3Q3KNS1 767 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 CDKL4Q5MAI5 379 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 EMBQ6PCB8 327 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 ADGRD1Q6QNK2 874 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 PAQR7Q86WK9 346 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 TTC29Q8NA56 475 aaPredicted RBP13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 EXT2Q93063 718 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 PTERQ96BW5 349 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 CCNL2Q96S94 520 aaPredicted RBP13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 NDC1Q9BTX1 674 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 EFHD1Q9BUP0 239 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 PARD6BQ9BYG5 372 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 SPRY4Q9C004 299 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 EPB41L4BQ9H329 900 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 CNOT10Q9H9A5 744 aaKnown RBP13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 ACTR5Q9H9F9 607 aaPredicted RBP13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 PPCSQ9HAB8 311 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 IGSF5Q9NSI5 407 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 TMEM184CQ9NVA4 438 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 WWOXQ9NZC7 414 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 PADI1Q9ULC6 663 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 DYRK1BQ9Y463 629 aa13.45□□□□□ -0.26
GTF3C3-206ENST00000448539 URB1O60287 2271 aaKnown RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 ZFYVE26Q68DK2 2539 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 APC2O95996 2303 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 ACACAQ13085 2346 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 TEX51A0A1B0GUA7 166 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 CCDC189A1A4V9 331 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 OR2A25A4D2G3 310 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 SUPT3HB4E1H0 165 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 H7BY64 318 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 ZNF749O43361 778 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 SRPX2O60687 465 aaPredicted RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 CTSVO60911 334 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 KERAO60938 352 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 SUPT3HO75486 399 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 EZRP15311 586 aaKnown RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 NPPBP16860 134 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 GMPRP36959 345 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 TMPRSS3P57727 454 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 VSX2P58304 361 aaPredicted RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 YBX1P67809 324 aaKnown RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 IRF9Q00978 393 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 TLE3Q04726 772 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 GRM7Q14831 915 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 PRAMEF17Q5VTA0 474 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 SULT1C3Q6IMI6 304 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 ZNF425Q6IV72 752 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 RNF44Q7L0R7 432 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 TIPARPQ7Z3E1 657 aaKnown RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 ISCA2Q86U28 154 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 THOC6Q86W42 341 aaKnown RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 TBC1D19Q8N5T2 526 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 ZNF655Q8N720 491 aaPredicted RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 ISL2Q96A47 359 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 RERGQ96A58 199 aaPredicted RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 RHBDF1Q96CC6 855 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 CABS1Q96KC9 395 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 SCYL1Q96KG9 808 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 PRAP1Q96NZ9 151 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 DHRS4Q9BTZ2 278 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 GPN2Q9H9Y4 310 aaPredicted RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 CUEDC1Q9NWM3 386 aaPredicted RBP13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 NUDT4Q9NZJ9 180 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 SRPK3Q9UPE1 567 aa13.44□□□□□ -0.26
GTF3C3-206ENST00000448539 IGKV1-8A0A0C4DH67 115 aa13.43□□□□□ -0.26
GTF3C3-206ENST00000448539 HCRTR1O43613 425 aa13.43□□□□□ -0.26
GTF3C3-206ENST00000448539 IPO13O94829 963 aaKnown RBP13.43□□□□□ -0.26
GTF3C3-206ENST00000448539 WDR47O94967 919 aa13.43□□□□□ -0.26
GTF3C3-206ENST00000448539 EIF2S1P05198 315 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms