RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 RDH11Q8TC12 318 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 UBTD2Q8WUN7 234 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 ZUFSPQ96AP4 578 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 PPM1MQ96MI6 270 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 FAM111AQ96PZ2 611 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 CD180Q99467 661 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 MAP3K3Q99759 626 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 TMEM79Q9BSE2 394 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 HAUS8Q9BT25 410 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 ACAT2Q9BWD1 397 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 PITPNM3Q9BZ71 974 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 SYNDIG1Q9H7V2 258 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 CCDC177Q9NQR7 707 aaPredicted RBP7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 C1GALT1Q9NS00 363 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 ABCF3Q9NUQ8 709 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 WWOXQ9NZC7 414 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 SEMA5BQ9P283 1151 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 COPG2Q9UBF2 871 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 TAC3Q9UHF0 121 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 ASB1Q9Y576 335 aa7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 TNPO3Q9Y5L0 923 aaKnown RBP7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 MN1Q10571 1320 aaPredicted RBP7.27□□□□□ -1.25
AC004540.1-206ENST00000448056 RP1P56715 2156 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 IGHV5-51A0A0C4DH38 117 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 IGKV1-8A0A0C4DH67 115 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 A0A0J9YY10 115 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TMEM120BA0PK00 339 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TLCD2A6NGC4 264 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 LRRC14BA6NHZ5 514 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 SLC9B1P1A6NJY1 282 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 A8MT66 165 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 A8MU76 341 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 D6RAR5 112 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TMX2-CTNND1H3BSU7 103 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 H7BY64 318 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 K7EPI3 171 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 E2F3O00716 465 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TM9SF1O15321 606 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CCNT2O60583 730 aaKnown RBP7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 RASSF9O75901 435 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CCNDBP1O95273 360 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 SIX3O95343 332 aaPredicted RBP7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 THRAP10827 490 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CDH3P22223 829 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 HRH2P25021 359 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 EEF1DP29692 281 aaKnown RBP7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CMPK1P30085 196 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 ALDH3A1P30838 453 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 GRIA3P42263 894 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 PDX1P52945 283 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 INHBCP55103 352 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 DNAJB13P59910 316 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 HERVK_113P63132 956 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 ABATP80404 500 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 NFKB2Q00653 900 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TRA2AQ13595 282 aaKnown RBP eCLIP7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 ZNF678Q5SXM1 525 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 PRAMEF13Q5VWM6 474 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 KIAA1614Q5VZ46 1190 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 ICE2Q659A1 982 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 FIGLAQ6QHK4 219 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 LCTLQ6UWM7 567 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 PRSS42Q7Z5A4 293 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 RAB44Q7Z6P3 723 aaPredicted RBP7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 B3GNT8Q7Z7M8 397 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TRIM73Q86UV7 250 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TMPRSS12Q86WS5 348 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 C10orf107Q8IVU9 208 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CARFQ8N187 725 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CACTIN-AS1Q8N1I8 211 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 DCBLD1Q8N8Z6 715 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 ABHD11Q8NFV4 315 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 ADAMTS14Q8WXS8 1223 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 KLHL6Q8WZ60 621 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 NEIL2Q969S2 332 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CCDC126Q96EE4 140 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CCDC74BQ96LY2 380 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TMEM74Q96NL1 305 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 PRAP1Q96NZ9 151 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 TRAPPC9Q96Q05 1148 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 C1QTNF3Q9BXJ4 246 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 ERVK-6Q9BXR3 956 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CAPS2Q9BXY5 557 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 MRPS30Q9NP92 439 aaKnown RBP7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 DNAJC11Q9NVH1 559 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 OXSMQ9NWU1 459 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 OPTCQ9UBM4 332 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 KLHL3Q9UH77 587 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 MID2Q9UJV3 735 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 SNX7Q9UNH6 387 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 CLCA2Q9UQC9 943 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 SH2B3Q9UQQ2 575 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 KLHL20Q9Y2M5 609 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 KLK4Q9Y5K2 254 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 KCNE2Q9Y6J6 123 aa7.26□□□□□ -1.25
AC004540.1-206ENST00000448056 PRAMEF10O60809 474 aa7.25□□□□□ -1.25
AC004540.1-206ENST00000448056 TRIM13O60858 407 aa7.25□□□□□ -1.25
AC004540.1-206ENST00000448056 ZBTB11O95625 1053 aaPredicted RBP7.25□□□□□ -1.25
AC004540.1-206ENST00000448056 BPGMP07738 259 aa7.25□□□□□ -1.25
AC004540.1-206ENST00000448056 ANKRD34CP0C6C1 535 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms