RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 GALNT2Q10471 571 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 NDUFAF5Q5TEU4 345 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 SPATC1Q76KD6 591 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 SLC2A11Q9BYW1 496 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 TRPV4Q9HBA0 871 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 WRAP73Q9P2S5 460 aaPredicted RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 A3GALT2U3KPV4 340 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CAPN15O75808 1086 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 M6PRP20645 277 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 PSMA3P25788 255 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ERVK-25P63136 954 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ZMYND11Q15326 602 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CELF2-AS1Q8N7Q2 184 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CEP76Q8TAP6 659 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 TRAPPC12Q8WVT3 735 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 PKP4Q99569 1192 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 WASH6PQ9NQA3 447 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 GPR25O00155 361 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CKMT1AP12532 417 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CFAP77Q6ZQR2 320 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 LINGO2Q7L985 606 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 RPL10LQ96L21 214 aaKnown RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 SERPINB11Q96P15 392 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 PIP5K1AQ99755 562 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 C17orf62Q9BQA9 187 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ACOT8O14734 319 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 POLR1CO15160 346 aaPredicted RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 STSP08842 583 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 EMP3P54852 163 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 LACC1Q8IV20 430 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ZSCAN1Q8NBB4 408 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 VMP1Q96GC9 406 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 TMEM168Q9H0V1 697 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 GULP1Q9UBP9 304 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 PCDHAC2Q9Y5I4 1007 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 PPP2R3BQ9Y5P8 575 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CTDSP2O14595 271 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ESR1P03372 595 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 UGT2B10P36537 528 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NUDT1P36639 197 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 CACNG1Q06432 222 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 FAM220AQ7Z4H9 259 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 AGBL3Q8NEM8 1001 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 PTTG3PQ9NZH4 202 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 HK1P19367 917 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 SELENBP1Q13228 472 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NTRK2Q16620 822 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 IFT27Q9BW83 186 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ITPKAP23677 461 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 HMGCS1Q01581 520 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 TARDBPQ13148 414 aaKnown RBP eCLIP7.67□□□□□ -1.182e-6■■■□□ 18.1
SMG1-202ENST00000446231 IRAK1BP1Q5VVH5 260 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 RETREG3Q86VR2 466 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 SLC39A13Q96H72 371 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 PIWIL1Q96J94 861 aaKnown RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 STRA6Q9BX79 667 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 PROS1P07225 676 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 PTGR1Q14914 329 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 GPR68Q15743 365 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 FAM151BQ6UXP7 276 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NRARPQ7Z6K4 114 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 METTL2AQ96IZ6 378 aaKnown RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 C2orf49Q9BVC5 232 aaPredicted RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 ZYG11BQ9C0D3 744 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 STARD7Q9NQZ5 370 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 LRFN2Q9ULH4 789 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NUMBLQ9Y6R0 609 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NPR2P20594 1047 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NTSP30990 170 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NUMBP49757 651 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 MAXP61244 160 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 SH3BP2P78314 561 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 DBPQ10586 325 aaPredicted RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 DSG2Q14126 1118 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 TAF13Q15543 124 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 DGLUCYQ7Z3D6 616 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 CLP1Q92989 425 aaKnown RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 TMEM125Q96AQ2 219 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ERVW-1Q9UQF0 538 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 HSPA14Q0VDF9 509 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 EEF1DP3Q658K8 133 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 PAQR3Q6TCH7 311 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 TMEM86AQ8N2M4 240 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 SLC43A3Q8NBI5 491 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 BPIFA1Q9NP55 256 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 A0A0X1KG70 313 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 OR56A5P0C7T3 313 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 OAFQ86UD1 273 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 SLC35B4Q969S0 331 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ACTR6Q9GZN1 396 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NUDT15Q9NV35 164 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 AIG1Q9NVV5 245 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 CORINQ9Y5Q5 1042 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 H1F0P07305 194 aaKnown RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 TRAPPC2P0DI81 140 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 TRAPPC2BP0DI82 140 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 ATAT1Q5SQI0 421 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ZNF648Q5T619 568 aaPredicted RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 PRPS2P11908 318 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms