RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SERPING1P05155 500 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 SAGP10523 405 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 AREGP15514 252 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 ADSSP30520 456 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 CHRNA3P32297 505 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 ARFIP1P53367 373 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 MTCP1P56278 107 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 PDE1BQ01064 536 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 PRKCEQ02156 737 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 TROAPQ12815 778 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 CUL3Q13618 768 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 IZUMO4Q1ZYL8 232 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 RUSC1-AS1Q66K80 236 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 KCTD11Q693B1 232 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 ASB18Q6ZVZ8 466 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 TUBA1AQ71U36 451 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 MARK2Q7KZI7 788 aaKnown RBP4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 RPAINQ86UA6 219 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 NAGSQ8N159 534 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 CLEC1AQ8NC01 280 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 CCNYQ8ND76 341 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLC44A1Q8WWI5 657 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 SYN2Q92777 582 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 ALG14Q96F25 216 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 DTD2Q96FN9 168 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 IGSF21Q96ID5 467 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF582Q96NG8 517 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 QRFPRQ96P65 431 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 TUBA1CQ9BQE3 449 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 TEX13AQ9BXU3 409 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 NT5C3AQ9H0P0 336 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 OSER1Q9NX31 292 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 AATFQ9NY61 560 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 TRIM10Q9UDY6 481 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 DLGAP4Q9Y2H0 992 aa4.19□□□□□ -1.74
HMGB1P48-201ENST00000446155 DCAF1Q9Y4B6 1507 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 PRSS51A0A1B0GVH4 220 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 C2orf92A0A1B0GVN3 265 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 CTAGE9A4FU28 777 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 EME2A4GXA9 379 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 NEMP2A6NFY4 417 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 PRAC2D3DTV9 90 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 FLRT2O43155 660 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 ATP9AO75110 1047 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 RAD51DO75771 328 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 WISP2O76076 250 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 AKR7A3O95154 331 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 C9P02748 559 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 CTAGE8P0CG41 777 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 MYL6BP14649 208 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 RPS2P15880 293 aaKnown RBP4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 HSD17B3P37058 310 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 USP8P40818 1118 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 MAGEA4P43358 317 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 NPBWR1P48145 328 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF132P52740 706 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 CD81P60033 236 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 LRRC74AQ0VAA2 488 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 PLA2G7Q13093 441 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 TRIM29Q14134 588 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZNF234Q14588 700 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 UGP2Q16851 508 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 CCDC40Q4G0X9 1142 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 LRRC38Q5VT99 294 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 FAM109BQ6ICB4 259 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 PSRC1Q6PGN9 363 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 SPSB3Q6PJ21 355 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 UNQ6126/PRO20091Q6UXV3 157 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 TMEM110Q86TL2 294 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 CTAGE4Q8IX94 777 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 KLHDC8AQ8IYD2 350 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLC5A8Q8N695 610 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 VANGL1Q8TAA9 524 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLC38A5Q8WUX1 472 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 DNAAF4Q8WXU2 420 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 CDKN2AIPNLQ96HQ2 116 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 NSMCE2Q96MF7 247 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 TXN2Q99757 166 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLX1AQ9BQ83 275 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 ATG101Q9BSB4 218 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 LMF2Q9BU23 707 aaKnown RBP4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 KRTAP1-5Q9BYS1 174 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 DNAJC4Q9NNZ3 241 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 NGBQ9NPG2 151 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 OR2W1Q9Y3N9 320 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 HBS1LQ9Y450 684 aaKnown RBP4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 LAMC3Q9Y6N6 1575 aa4.18□□□□□ -1.74
HMGB1P48-201ENST00000446155 GREB1LQ9C091 1923 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 WDR62O43379 1518 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZCWPW2A0A1B0GU75 182 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 OR2M5A3KFT3 312 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 CFAP73A6NFT4 308 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 ARHGAP42A6NI28 874 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 KRTAP29-1A8MX34 341 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 MCF2LO15068 1137 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 PRAF2O60831 178 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 HSF2BPO75031 334 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 PRDM1O75626 825 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 DIRAS3O95661 229 aa4.17□□□□□ -1.74
HMGB1P48-201ENST00000446155 APBB3O95704 486 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms