RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 C18orf21Q32NC0 220 aaPredicted RBP11.83□□□□□ -0.52
USP1-203ENST00000442679 PTCHD3Q3KNS1 767 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 SULT1C3Q6IMI6 304 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 FBXO42Q6P3S6 717 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 C6orf15Q6UXA7 325 aaPredicted RBP11.83□□□□□ -0.52
USP1-203ENST00000442679 LRRC69Q6ZNQ3 347 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 TIPARPQ7Z3E1 657 aaKnown RBP11.83□□□□□ -0.52
USP1-203ENST00000442679 ADCK2Q7Z695 626 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 THOC6Q86W42 341 aaKnown RBP11.83□□□□□ -0.52
USP1-203ENST00000442679 PAQR7Q86WK9 346 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 DTX1Q86Y01 620 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 TDRPQ86YL5 185 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 TMEM126BQ8IUX1 230 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 GPR135Q8IZ08 494 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 PLD6Q8N2A8 252 aaKnown RBP11.83□□□□□ -0.52
USP1-203ENST00000442679 TCAIMQ8N3R3 496 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 RHEBL1Q8TAI7 183 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 EXT2Q93063 718 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 TSNARE1Q96NA8 513 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 PRAP1Q96NZ9 151 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 GPR78Q96P69 363 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 ATOH8Q96SQ7 321 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 DPH1Q9BZG8 443 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 RRAGDQ9NQL2 400 aaPredicted RBP11.83□□□□□ -0.52
USP1-203ENST00000442679 TMEM184CQ9NVA4 438 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 ZNF358Q9NW07 568 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 CUEDC1Q9NWM3 386 aaPredicted RBP11.83□□□□□ -0.52
USP1-203ENST00000442679 IRAK4Q9NWZ3 460 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 ANKMY1Q9P2S6 941 aa11.83□□□□□ -0.52
USP1-203ENST00000442679 TMEM184BQ9Y519 407 aaPredicted RBP11.83□□□□□ -0.52
USP1-203ENST00000442679 DMXL2Q8TDJ6 3036 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 A0A0J9YVX5 310 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 TEX51A0A1B0GUA7 166 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 SRRM3A6NNA2 597 aaPredicted RBP11.82□□□□□ -0.52
USP1-203ENST00000442679 SYCE1LA8MT33 242 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 E7EQ34 232 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 UBXN8O00124 270 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 TAPBPO15533 448 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 KLK10O43240 276 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 RAD1O60671 282 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 DLGAP3O95886 979 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 MT-ND3P03897 115 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 NUDT17P0C025 328 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 CDH1P12830 882 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 GGT5P36269 586 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 GDF5P43026 501 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 SLC6A12P48065 614 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 IFFO1Q0D2I5 559 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 CLN3Q13286 438 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 ST3GAL2Q16842 350 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 TSNAXIP1Q2TAA8 658 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 PRAMEF17Q5VTA0 474 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 ZNF425Q6IV72 752 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 CACNA2D3Q8IZS8 1091 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 NLGN4XQ8N0W4 816 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 MREGQ8N565 214 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 GALNT6Q8NCL4 622 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 PDPRQ8NCN5 879 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 NLGN4YQ8NFZ3 816 aaPredicted RBP11.82□□□□□ -0.52
USP1-203ENST00000442679 OR2W6PQ8NHA6 318 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 EPS8L3Q8TE67 593 aaKnown RBP11.82□□□□□ -0.52
USP1-203ENST00000442679 NKD1Q969G9 470 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 CABS1Q96KC9 395 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 SCYL1Q96KG9 808 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 OR4K3Q96R72 315 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 ZFYVE21Q9BQ24 234 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 SELENOSQ9BQE4 189 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 CNOT10Q9H9A5 744 aaKnown RBP11.82□□□□□ -0.52
USP1-203ENST00000442679 ACTR5Q9H9F9 607 aaPredicted RBP11.82□□□□□ -0.52
USP1-203ENST00000442679 WWOXQ9NZC7 414 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 NUDT4Q9NZJ9 180 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 PTBP2Q9UKA9 531 aaKnown RBP11.82□□□□□ -0.52
USP1-203ENST00000442679 SH2B3Q9UQQ2 575 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 SLC22A14Q9Y267 594 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 DYRK1BQ9Y463 629 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 PCDHB3Q9Y5E6 796 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 IGF2RP11717 2491 aa11.82□□□□□ -0.52
USP1-203ENST00000442679 A0A087WV48 116 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 LOC105369274A0A096LPK9 316 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 LOC102723532A0A0G2JNH3 316 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 TLDC2A0PJX2 215 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 H3BMH7 237 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 MAP2K7O14733 419 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 HAT1O14929 419 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 ZNF749O43361 778 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 SRPX2O60687 465 aaPredicted RBP11.81□□□□□ -0.52
USP1-203ENST00000442679 CPNE3O75131 537 aaKnown RBP11.81□□□□□ -0.52
USP1-203ENST00000442679 CDH16O75309 829 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 STK16O75716 305 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 IPO13O94829 963 aaKnown RBP11.81□□□□□ -0.52
USP1-203ENST00000442679 WDR47O94967 919 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 RBP1P09455 135 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 CCNYL3P0C7X3 344 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 EZRP15311 586 aaKnown RBP11.81□□□□□ -0.52
USP1-203ENST00000442679 HSPA7P48741 367 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 ATP1A2P50993 1020 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 CCR8P51685 355 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 VSX2P58304 361 aaPredicted RBP11.81□□□□□ -0.52
USP1-203ENST00000442679 RELAQ04206 551 aa11.81□□□□□ -0.52
USP1-203ENST00000442679 MAP7Q14244 749 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms