RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 LCN1P1Q5VSP4 162 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 HFE2Q6ZVN8 426 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 MEIOBQ8N635 442 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 OR10Z1Q8NGY1 313 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ANGPTL6Q8NI99 470 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 RNASE11Q8TAA1 199 aaKnown RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 TSPEARQ8WU66 669 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 CXorf40BQ96DE9 158 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 CRELD1Q96HD1 420 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 HS6ST2Q96MM7 605 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 RDH12Q96NR8 316 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 SLC29A1Q99808 456 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 WDR83Q9BRX9 315 aaKnown RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 LRRC3Q9BY71 257 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZDHHC6Q9H6R6 413 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 HMX1Q9NP08 348 aaPredicted RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 CCM2LQ9NUG4 571 aaPredicted RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 C14orf105Q9NVL8 296 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 MAT2BQ9NZL9 334 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 GIMAP2Q9UG22 337 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 RUVBL1Q9Y265 456 aaKnown RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 LYVE1Q9Y5Y7 322 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 DDX60Q8IY21 1712 aaKnown RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 FAM92AA1XBS5 289 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 FAM234BA2RU67 622 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 C9IYK1 514 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 BTN3A3O00478 584 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 STX16O14662 325 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 CASKO14936 926 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 SYN3O14994 580 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ATG13O75143 517 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 SLC25A12O75746 678 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 SCO1O75880 301 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 SLC35E2BP0CK96 405 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 CHRNEQ04844 493 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 PPA1Q15181 289 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 DUSP28Q4G0W2 176 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 RABL3Q5HYI8 236 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 UBE2R2Q712K3 238 aaPredicted RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 CAMKK1Q8N5S9 505 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 NAT16Q8N8M0 369 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 UXS1Q8NBZ7 420 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 OR8H1Q8NGG4 311 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 OR10A6Q8NH74 314 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 OR5K1Q8NHB7 308 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 SNIP1Q8TAD8 396 aaKnown RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 OR8D1Q8WZ84 308 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 THRSPQ92748 146 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ESAMQ96AP7 390 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 AP2M1Q96CW1 435 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 NARS2Q96I59 477 aaKnown RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 SLC45A3Q96JT2 553 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 PCYT2Q99447 389 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 GPR21Q99679 349 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ACBD6Q9BR61 282 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 FEM1AQ9BSK4 669 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 DSN1Q9H410 356 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 SOX17Q9H6I2 414 aaPredicted RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 ERVMER34-1Q9H9K5 563 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 TMEM138Q9NPI0 162 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 SMOXQ9NWM0 555 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZNF282Q9UDV7 671 aaPredicted RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZNHIT2Q9UHR6 403 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 RIMS3Q9UJD0 308 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 PCDHGB1Q9Y5G3 927 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 CEPT1Q9Y6K0 416 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 C17orf113A0A1B0GUU1 675 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 MYBPHLA2RUH7 354 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 METTL21EPA6NDL7 271 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZNF99A8MXY4 864 aaPredicted RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 SOCS2O14508 198 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 VILLO15195 856 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 GRID2O43424 1007 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 TLR5O60602 858 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 OR4F21O95013 312 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 POP4O95707 220 aaKnown RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 SERPINA3P01011 423 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 MNDAP41218 407 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 CYP4F2P78329 520 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 PITPNAQ00169 270 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 PCDH1Q08174 1060 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 CYP4F3Q08477 520 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 MAP2K5Q13163 448 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 TAZQ16635 292 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZNF773Q6PK81 442 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 COMMD2Q86X83 199 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 GPALPP1Q8IXQ4 340 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZBTB2Q8N680 514 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 OR4A15Q8NGL6 344 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 TMBIM1Q969X1 311 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZNF486Q96H40 463 aaPredicted RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 FUBP3Q96I24 572 aaKnown RBP eCLIP6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZNF514Q96K75 400 aaPredicted RBP6.22□□□□□ -1.41
BDNF-211ENST00000439476 NPY6RQ99463 290 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 COPS4Q9BT78 406 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 PDCD10Q9BUL8 212 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 VRTNQ9H8Y1 702 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 ZFYVE1Q9HBF4 777 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 TMEM27Q9HBJ8 222 aa6.22□□□□□ -1.41
BDNF-211ENST00000439476 BPIFA1Q9NP55 256 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms