RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 A0A1B0GX78 115 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 FITM1A5D6W6 292 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 KRT87PA6NCN2 255 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 B8ZZF3 427 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 PEX12O00623 359 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 PRPF4O43172 522 aaKnown RBP eCLIP10.02□□□□□ -0.815e-6■□□□□ 10.8
MCF2L-216ENST00000439475 ALBP02768 609 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 PRB1P04280 392 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 ANXA5P08758 320 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 EZRP15311 586 aaKnown RBP10.02□□□□□ -0.81
MCF2L-216ENST00000439475 STX2P32856 288 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 PHBP35232 272 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 FOLR3P41439 243 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 EMP3P54852 163 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 RRADP55042 308 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 RPS18P62269 152 aaKnown RBP10.02□□□□□ -0.81
MCF2L-216ENST00000439475 TIAL1Q01085 375 aaKnown RBP eCLIP10.02□□□□□ -0.81
MCF2L-216ENST00000439475 SLC7A5Q01650 507 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 GUCY2DQ02846 1103 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 NAB1Q13506 487 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 NAE1Q13564 534 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 USP10Q14694 798 aaKnown RBP10.02□□□□□ -0.81
MCF2L-216ENST00000439475 NDUFA9Q16795 377 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 NKAIN1Q4KMZ8 207 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 GARNL3Q5VVW2 1013 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 ZNF385CQ66K41 422 aaPredicted RBP10.02□□□□□ -0.81
MCF2L-216ENST00000439475 PRMT9Q6P2P2 845 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 LCTLQ6UWM7 567 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 RNF44Q7L0R7 432 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 C17orf64Q86WR6 236 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 APLFQ8IW19 511 aaPredicted RBP10.02□□□□□ -0.81
MCF2L-216ENST00000439475 ZNF843Q8N446 348 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 TBC1D19Q8N5T2 526 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 PTERQ96BW5 349 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 THAP11Q96EK4 314 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 ZNF285Q96NJ3 590 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 OLFM1Q99784 485 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 HAUS8Q9BT25 410 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 ATG10Q9H0Y0 220 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 ACSS2Q9NR19 701 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 ENAMQ9NRM1 1142 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 SLC17A6Q9P2U8 582 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 ADAMTS6Q9UKP5 1117 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 NOVA2Q9UNW9 492 aaKnown RBP10.02□□□□□ -0.81
MCF2L-216ENST00000439475 PTRH2Q9Y3E5 179 aaKnown RBP10.02□□□□□ -0.81
MCF2L-216ENST00000439475 KCNMB2Q9Y691 235 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 CACNA1GO43497 2377 aa10.02□□□□□ -0.81
MCF2L-216ENST00000439475 WDFY3Q8IZQ1 3526 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 TCRBV9S1A1TA0A576 114 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 H0YGG7 62 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 H7BY64 318 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 KLHL41O60662 606 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 CTSVO60911 334 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 RFPL1O75677 317 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 GUCA1CO95843 209 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 CAPN1P07384 714 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 STMN1P16949 149 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ZNF37AP17032 561 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ITGAXP20702 1163 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 TAS2R39P59534 338 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ARF3P61204 181 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-216ENST00000439475 RPS15AP62244 130 aaKnown RBP10.01□□□□□ -0.81
MCF2L-216ENST00000439475 TBPL1P62380 186 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 NFATC3Q12968 1075 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ATP1A1-AS1Q5TC04 95 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 FRMPD2BQ6IN97 320 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ZNF425Q6IV72 752 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 LCN10Q6JVE6 187 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 MRPL14Q6P1L8 145 aaKnown RBP10.01□□□□□ -0.81
MCF2L-216ENST00000439475 FAM198BQ6UWH4 519 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ZDHHC24Q6UX98 284 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 FRA10AC1Q70Z53 315 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 MED25Q71SY5 747 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 OVCH1Q7RTY7 1134 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ADAMTSL2Q86TH1 951 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 PAQR7Q86WK9 346 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 LRRC56Q8IYG6 542 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-216ENST00000439475 PPM1NQ8N819 430 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 TMEM102Q8N9M5 508 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-216ENST00000439475 C9orf43Q8TAL5 461 aaPredicted RBP10.01□□□□□ -0.81
MCF2L-216ENST00000439475 COL26A1Q96A83 441 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 FKBP10Q96AY3 582 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 NACC2Q96BF6 587 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 MVB12AQ96EY5 273 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 CABS1Q96KC9 395 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 FER1L6-AS2Q96M78 137 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 PRAP1Q96NZ9 151 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 RUFY1Q96T51 708 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 RBBP8Q99708 897 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 EGFL8Q99944 293 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 LRRC4CQ9HCJ2 640 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ZNF304Q9HCX3 659 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 SLC6A20Q9NP91 592 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 STARD5Q9NSY2 213 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 CTNNAL1Q9UBT7 734 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 TLK1Q9UKI8 766 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 NXT1Q9UKK6 140 aaKnown RBP10.01□□□□□ -0.81
MCF2L-216ENST00000439475 PSAT1Q9Y617 370 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 HEATR5BQ9P2D3 2071 aa10.01□□□□□ -0.81
MCF2L-216ENST00000439475 ARGFXA6NJG6 315 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms