RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 DCDC1P59894 354 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 ELAVL3Q14576 367 aaKnown RBP13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 TBPL2Q6SJ96 375 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 TRIM46Q7Z4K8 759 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 BEND7Q8N7W2 519 aaPredicted RBP13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 ARRDC3Q96B67 414 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 ZNF583Q96ND8 569 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 WRAP53Q9BUR4 548 aaKnown RBP13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 RIOK2Q9BVS4 552 aaKnown RBP13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC32A1Q9H598 525 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 TMEM45AQ9NWC5 275 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 DLGAP4Q9Y2H0 992 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 FADS3Q9Y5Q0 445 aa13.48□□□□□ -0.25
PTCHD3-201ENST00000438700 LRRK1Q38SD2 2015 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 PLK4O00444 970 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 WDR47O94967 919 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 KAT7O95251 611 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 B3GALT4O96024 378 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 UMPSP11172 480 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ELK4P28324 431 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 IL12RB1P42701 662 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ITGADQ13349 1161 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 FXNQ16595 210 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ZNF648Q5T619 568 aaPredicted RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 SPRED1Q7Z699 444 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 SNX29P2Q8IUI4 249 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC22A15Q8IZD6 547 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 OR2T12Q8NG77 320 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 FBXO30Q8TB52 745 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 SELENOMQ8WWX9 145 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 USP7Q93009 1102 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ELSPBP1Q96BH3 223 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 AURKBQ96GD4 344 aaPredicted RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 OR52E6Q96RD3 313 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC6A13Q9NSD5 602 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 C1orf109Q9NX04 203 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC25A37Q9NYZ2 338 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 BRWD1Q9NSI6 2320 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 GRXCR2A6NFK2 248 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 SPINT1O43278 529 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 CBSLP0DN79 551 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 BCKDHAP12694 445 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ITPKAP23677 461 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ITGB7P26010 798 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 AOAHP28039 575 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 CBSP35520 551 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 RPS9P46781 194 aaKnown RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 MAD2L1Q13257 205 aaPredicted RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ACOX1Q15067 660 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 PTCHD3Q3KNS1 767 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ZIK1Q3SY52 487 aaPredicted RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 HENMT1Q5T8I9 393 aaKnown RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 EGFLAMQ63HQ2 1017 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 LIPIQ6XZB0 460 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ANKRD46Q86W74 232 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 PHACTR4Q8IZ21 702 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 PAPD5Q8NDF8 572 aaKnown RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 TMIEQ8NEW7 156 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 SUSD6Q92537 303 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 FAM129BQ96TA1 746 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 DOK1Q99704 481 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 ATG10Q9H0Y0 220 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 PARVBQ9HBI1 364 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 TUBA8Q9NY65 449 aaPredicted RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 HCN2Q9UL51 889 aa13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 MAGED1Q9Y5V3 778 aaPredicted RBP13.47□□□□□ -0.25
PTCHD3-201ENST00000438700 DENND4AQ7Z401 1863 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 TRIM64A6NGJ6 449 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 OR2AG2A6NM03 316 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 FADS2P1A8MWK0 482 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 AREL1O15033 823 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 KRT6AP02538 564 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 KRT6BP04259 564 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 GGT1P19440 569 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 KRT6CP48668 564 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 CYP4F3Q08477 520 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 NFATC3Q12968 1075 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 NR1D2Q14995 579 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 GALNT18Q6P9A2 607 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 ENPP6Q6UWR7 440 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 TECPR1Q7Z6L1 1165 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 MSRB3Q8IXL7 192 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 RNF175Q8N4F7 328 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 BPIFB6Q8NFQ5 453 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 OR8J3Q8NGG0 315 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 TSSK3Q96PN8 268 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 P2RY13Q9BPV8 354 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 ELOVL6Q9H5J4 265 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 CLMPQ9H6B4 373 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 CARS2Q9HA77 564 aaKnown RBP13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 LTB4R2Q9NPC1 389 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 CLDND1Q9NY35 253 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 SMPD3Q9NY59 655 aaPredicted RBP13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 SLC22A14Q9Y267 594 aa13.46□□□□□ -0.25
PTCHD3-201ENST00000438700 IFRD1O00458 451 aaPredicted RBP13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 GSTA4O15217 222 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 GMNNO75496 209 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 LRATO95237 230 aa13.46□□□□□ -0.26
PTCHD3-201ENST00000438700 EPHX1P07099 455 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms