RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 MAL2Q969L2 176 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 MYADMQ96S97 322 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 CENPOQ9BU64 300 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 BDH2Q9BUT1 245 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 KCTD5Q9NXV2 234 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 PTTG2Q9NZH5 202 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 PKD2L2Q9NZM6 624 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 NCOR1O75376 2440 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ELOVL7A1L3X0 281 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 TBC1D3BA6NDS4 549 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 MYO1GB0I1T2 1018 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 E7EQ34 232 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 G3V2T6 193 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 hCG_2039718K7EN88 272 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 CXCR6O00574 342 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ZBTB11O95625 1053 aaPredicted RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 NUDT7P0C024 238 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 EBLN1P0CF75 366 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 TIMP2P16035 220 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 SDC1P18827 310 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 GGT1P19440 569 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 RPS3P23396 243 aaKnown RBP eCLIP9.18□□□□□ -0.941e-7■■■■□ 20.3
CUX1-206ENST00000437600 JAK1P23458 1154 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 S100A3P33764 101 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 CSNK1DP48730 415 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ARSFP54793 590 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 IRF8Q02556 426 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 GRIK2Q13002 908 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 GTF2H3Q13889 308 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 TTLL9Q3SXZ7 439 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 GPR33Q49SQ1 333 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 AASDHQ4L235 1098 aaPredicted RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 FNDC3BQ53EP0 1204 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 INTS11Q5TA45 600 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 CES5AQ6NT32 575 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ZCCHC8Q6NZY4 707 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 CYP2U1Q7Z449 544 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 VTCN1Q7Z7D3 282 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 RIMKLAQ8IXN7 391 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 OSCP1Q8WVF1 389 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 LZICQ8WZA0 190 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 FGF14Q92915 247 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 UBE2FQ969M7 185 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ACAT2Q9BWD1 397 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 PLA2G2FQ9BZM2 168 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 PCDHB3Q9Y5E6 796 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 C16orf96A6NNT2 1141 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 HS6ST1O60243 411 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 SLC16A8O95907 504 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ALBP02768 609 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 CD9P21926 228 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 FUT4P22083 530 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 SOX9P48436 509 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 RPL26P61254 145 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 SIM2Q14190 667 aaPredicted RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 ACOX1Q15067 660 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 PON2Q15165 354 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 TCEA2Q15560 299 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 FAM98BQ52LJ0 330 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 ANGPTL8Q6UXH0 198 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 TMEM26Q6ZUK4 368 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 KCTD8Q6ZWB6 473 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 PARS2Q7L3T8 475 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 SPRED1Q7Z699 444 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 GPR149Q86SP6 731 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ZDHHC13Q8IUH4 622 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 DPP10Q8N608 796 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 BPIFB6Q8NFQ5 453 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 FAM120BQ96EK7 910 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 ASB16Q96NS5 453 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 MCCC1Q96RQ3 725 aaPredicted RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 NTMT1Q9BV86 223 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ING2Q9H160 280 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 TOR3AQ9H497 397 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 SERHLQ9NQF3 203 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 RSL24D1Q9UHA3 163 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 IL36AQ9UHA7 158 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 FBXO10Q9UK96 956 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 SLC8A2Q9UPR5 921 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 PCDHGA8Q9Y5G5 932 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 CFAP20Q9Y6A4 193 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 SCAMP1O15126 338 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 SGTAO43765 313 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 CREG1O75629 220 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 KRT6AP02538 564 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 KRT6BP04259 564 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 CISD3P0C7P0 127 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 CD247P20963 164 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 EPHA2P29317 976 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 KRT6CP48668 564 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 PFN3P60673 137 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 ST8SIA6P61647 398 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 COQ5Q5HYK3 327 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 PARM1Q6UWI2 310 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 ZNF548Q8NEK5 533 aaPredicted RBP9.17□□□□□ -0.94
CUX1-206ENST00000437600 SLC47A1Q96FL8 570 aa9.17□□□□□ -0.94
CUX1-206ENST00000437600 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
CUX1-206ENST00000437600 CPEB1Q9BZB8 566 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms