RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GLULP15104 373 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 CHMP24386 653 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 HOXD13P35453 343 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 SOX3P41225 446 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 PRELPP51888 382 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 IRX4P78413 519 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 CREB5Q02930 508 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 IRF3Q14653 427 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 CA9Q16790 459 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 UGT3A2Q3SY77 523 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 PRR30Q53SZ7 412 aaPredicted RBP2.8□□□□□ -1.96
PTPN4-205ENST00000433888 SYT14P1Q58G82 188 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 RILPL1Q5EBL4 403 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 TIPARPQ7Z3E1 657 aaKnown RBP2.8□□□□□ -1.96
PTPN4-205ENST00000433888 SZRD1Q7Z422 152 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 ADGRF2Q8IZF7 708 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 GPD1LQ8N335 351 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 FAM20AQ96MK3 541 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 TIGD1Q96MW7 591 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 OLFM1Q99784 485 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 FAM49AQ9H0Q0 323 aaPredicted RBP2.8□□□□□ -1.96
PTPN4-205ENST00000433888 WSB2Q9NYS7 404 aaPredicted RBP2.8□□□□□ -1.96
PTPN4-205ENST00000433888 NFKBIL1Q9UBC1 381 aaPredicted RBP2.8□□□□□ -1.96
PTPN4-205ENST00000433888 ZNF644Q9H582 1327 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-205ENST00000433888 A0A087WWV3 80 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 IGKV6D-21A0A0A0MT36 114 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 A8MV72 311 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-205ENST00000433888 SNURFLB1AK76 121 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 NPIPB9F8W1W9 429 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 TEX28O15482 410 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 ZWINTO95229 277 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 PRB2P02812 416 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-205ENST00000433888 GP1BBP13224 206 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 JAK1P23458 1154 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 CSTF2P33240 577 aaKnown RBP eCLIP2.79□□□□□ -1.96
PTPN4-205ENST00000433888 ARL3P36405 182 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 SLC9A3P48764 834 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 ARSEP51690 589 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 FCHO2Q0JRZ9 810 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 MAMLD1Q13495 774 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 CUL4AQ13619 759 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 CDH18Q13634 790 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 CAPRIN1Q14444 709 aaKnown RBP2.79□□□□□ -1.96
PTPN4-205ENST00000433888 BECN1Q14457 450 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 WTAPQ15007 396 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 ALDH1L2Q3SY69 923 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 FAM182AQ5T1J6 154 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 TMPRSS11BQ86T26 416 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 C9orf43Q8TAL5 461 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-205ENST00000433888 CALML4Q96GE6 196 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 CNOT6LQ96LI5 555 aaKnown RBP2.79□□□□□ -1.96
PTPN4-205ENST00000433888 LPAR4Q99677 370 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 SLF1Q9BQI6 1058 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 GKN1Q9NS71 199 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 B4GALT7Q9UBV7 327 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 ZNF148Q9UQR1 794 aa2.79□□□□□ -1.96
PTPN4-205ENST00000433888 SCGB1D1O95968 90 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 VPREB1P12018 145 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 ALOX12P18054 663 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 RPL35AP18077 110 aaKnown RBP2.78□□□□□ -1.96
PTPN4-205ENST00000433888 ZBTB25P24278 435 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 PTPN3P26045 913 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 GCH1P30793 250 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 PNLIPRP2P54317 469 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 NAP1L1P55209 391 aaKnown RBP2.78□□□□□ -1.96
PTPN4-205ENST00000433888 IFI35P80217 286 aaPredicted RBP2.78□□□□□ -1.96
PTPN4-205ENST00000433888 TEX38Q6PEX7 206 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 BAIAP2L2Q6UXY1 529 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 CDHR3Q6ZTQ4 885 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 LINC00346Q8IVM7 164 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 FBXO39Q8N4B4 442 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 KLHDC1Q8N7A1 406 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 SSMEM1Q8WWF3 244 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 FAM120BQ96EK7 910 aaKnown RBP2.78□□□□□ -1.96
PTPN4-205ENST00000433888 RADILQ96JH8 1075 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 CHCHD5Q9BSY4 110 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 CCDC68Q9H2F9 335 aa2.78□□□□□ -1.96
PTPN4-205ENST00000433888 GPN1Q9HCN4 374 aaPredicted RBP2.78□□□□□ -1.96
PTPN4-205ENST00000433888 A0A1W2PQ09 198 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 VILLO15195 856 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 PHF1O43189 567 aaPredicted RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 DIAPH2O60879 1101 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 KRT33AO76009 404 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 BEST1O76090 585 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 OXTRP30559 389 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 LBX1P52954 281 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 CLNS1AP54105 237 aaKnown RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 MFAP4P55083 255 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 NDPQ00604 133 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 CHAF1BQ13112 559 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 AIMP2Q13155 320 aaKnown RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 BMP2KLQ5H9B9 411 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 RNASEH2BQ5TBB1 312 aaKnown RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 FHL5Q5TD97 284 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 DHRS7BQ6IAN0 325 aaPredicted RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 LCLAT1Q6UWP7 414 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 DNAJB7Q7Z6W7 309 aaPredicted RBP2.77□□□□□ -1.97
PTPN4-205ENST00000433888 ADCK1Q86TW2 530 aa2.77□□□□□ -1.97
PTPN4-205ENST00000433888 TTC30BQ8N4P2 665 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms