RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 OR3A1P47881 315 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 GLIPR1P48060 266 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 GAS1P54826 345 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 MAZP56270 477 aaKnown RBP2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 KLC1Q07866 573 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 ACTN3Q08043 901 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 RASGEF1BQ0VAM2 473 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 ILF2Q12905 390 aaKnown RBP2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 DMP1Q13316 513 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 PPP2R5CQ13362 524 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 UGP2Q16851 508 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 C2orf76Q3KRA6 126 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 FUT11Q495W5 492 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 PDLIM3Q53GG5 364 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 ASPRV1Q53RT3 343 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 XKR3Q5GH77 459 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 DCAF10Q5QP82 559 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 LYSMD4Q5XG99 296 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 PODNL1Q6PEZ8 512 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCDC91Q7Z6B0 441 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC9B2Q86UD5 537 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 KLHL7Q8IXQ5 586 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 RYBPQ8N488 228 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 C10orf53Q8N6V4 93 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 SPATA20Q8TB22 786 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 ATG101Q9BSB4 218 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 S1PR5Q9H228 398 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 C6orf106Q9H6K1 298 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 SRD5A3Q9H8P0 318 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 DBNDD1Q9H9R9 158 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 MIS18AQ9NYP9 233 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 UHRF1BP1LA0JNW5 1464 aa2.88□□□□□ -1.95
HMGB1P27-201ENST00000431429 GPRASP1Q5JY77 1395 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 ADCY10Q96PN6 1610 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 PLSCR5A0PG75 271 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 ILVBLA1L0T0 632 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 C2orf81A6NN90 581 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 H0YIG0 161 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 SNX3O60493 162 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 PRKRAO75569 313 aaKnown RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 FGF3P11487 239 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 VCLP18206 1134 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 EPORP19235 508 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 CA6P23280 308 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 IL15P40933 162 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 ARHGAP1Q07960 439 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 RPS6KA1Q15418 735 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 PKN2Q16513 984 aaKnown RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 IQCCQ4KMZ1 466 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 XKR6Q5GH73 641 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 TECRLQ5HYJ1 363 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 PDSS1Q5T2R2 415 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 IRAK1BP1Q5VVH5 260 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 WBP2NLQ6ICG8 309 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 OR4A47Q6IF82 309 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 KLHL10Q6JEL2 608 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 TMEM270Q6UE05 265 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 C9orf139Q6ZV77 190 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 MEX3DQ86XN8 651 aaKnown RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 CNTN4Q8IWV2 1026 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 NDUFAF2Q8N183 169 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZNF843Q8N446 348 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC24A4Q8NFF2 622 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 CTCFLQ8NI51 663 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 FCAMRQ8WWV6 532 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 KRT35Q92764 455 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 SNX21Q969T3 373 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 BSCL2Q96G97 398 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 EPSTI1Q96J88 318 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 ST6GAL2Q96JF0 529 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 RASL10BQ96S79 203 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 NDNQ99608 321 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 HNRNPABQ99729 332 aaKnown RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 WACQ9BTA9 647 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 OR2B2Q9GZK3 357 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 SHARPINQ9H0F6 387 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 HIPK2Q9H2X6 1198 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 CPVLQ9H3G5 476 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 TFB2MQ9H5Q4 396 aaKnown RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 MRPL17Q9NRX2 175 aaKnown RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 PHPT1Q9NRX4 125 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 STUB1Q9UNE7 303 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 PRDM2Q13029 1718 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 ERICH3Q5RHP9 1530 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 ARAP3Q8WWN8 1544 aa2.87□□□□□ -1.95
HMGB1P27-201ENST00000431429 KIAA1217Q5T5P2 1943 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 IGLV9-49A0A0B4J1Y8 123 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 TRBV5-5A0A0J9YX44 114 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 C17orf105B2RV13 164 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 KBTBD13C9JR72 458 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 PRSS46E5RG02 174 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 C16orf97H3BN30 126 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 DDX39AO00148 427 aaKnown RBP2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCL24O00175 119 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 CAPN9O14815 690 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 ATP6V0E1O15342 81 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 RPS6KA5O75582 802 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 AKAP3O75969 853 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 KRT33AO76009 404 aa2.86□□□□□ -1.95
HMGB1P27-201ENST00000431429 APOHP02749 345 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms